RetrogeneDB ID: | retro_meug_849 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold20744:53535..54002(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLC7A6OS | ||
Ensembl ID: | ENSMEUG00000003614 | ||
Aliases: | None | ||
Description: | solute carrier family 7, member 6 opposite strand [Source:HGNC Symbol;Acc:25807] |
Percent Identity: | 63.69 % |
Parental protein coverage: | 58.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PPKSDPDVILCNSVRMIRERLAISKDGKGTNHREKEDE-YVYDIYYMETSTPGWIESILSVQPYSEEWEL |
P.KS.P.VI..NS.R.IRE..AI.KDGKGT.HR.KE.E.YV.D......S.P......LS.QP.S...EL | |
Retrocopy | PEKSHPHVIISNSLRVIREPQAICKDGKGTGHRDKEEEDYVDDLKDLKMSAPRSTAGKLSGQPHSQDCEL |
Parental | VADDHQAEEIDDDDDEDENSENHWRNEYPDE-EEGSSDRESTRGSDEEYGSFSDEESSVIRPRKWNKYPY |
.ADD...E...DDDDEDEN..NHWRNEYPD..EEGS.D.EST.GSD.EYGSF.D.E.SVIRPRKWNKYP. | |
Retrocopy | EADDQAGEIEEDDDDEDENFGNHWRNEYPDQ<EEGSRDTESTAGSDGEYGSFPDKERSVIRPRKWNKYPC |
Parental | DVLKEFEYDSSQDLDSD |
DVL.E..YD.SQD.DSD | |
Retrocopy | DVLQECQYDGSQDFDSD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000007958 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000003614 | 6 retrocopies | |
Myotis lucifugus | ENSMLUG00000005953 | 1 retrocopy |