RetrogeneDB ID: | retro_mgal_14 | ||
Retrocopylocation | Organism: | Turkey (Meleagris gallopavo) | |
Coordinates: | 10:3431918..3432636(+) | ||
Located in intron of: | ENSMGAG00000002072 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5A1Z | ||
Ensembl ID: | ENSMGAG00000009963 | ||
Aliases: | None | ||
Description: | ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1NC68] |
Percent Identity: | 85.95 % |
Parental protein coverage: | 69.45 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | TAEVSSILEERILGANTSAELEETGHVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVV |
TAEVSSILEE.ILGA..SAELEETG.V.SIGDGIA.VYGLRNVQAEEM.EFSSGLKG.SLNLEPDNVGVV | |
Retrocopy | TAEVSSILEEHILGADSSAELEETGRVHSIGDGIACVYGLRNVQAEEMTEFSSGLKGTSLNLEPDNVGVV |
Parental | VFGNDRLIKEGDVVKRTGAIVDVPVGEELLGRVVDALGNPIDGKSSFTSKMRRRVGLKAPGIIPRISVRE |
VFGNDRL.KEGDVVKRTGAIV.VPVGEELLGRVVDALGNPIDGK...TSK..RRVGLKAPGIIPRISV.E | |
Retrocopy | VFGNDRLTKEGDVVKRTGAIVGVPVGEELLGRVVDALGNPIDGKGPITSKTHRRVGLKAPGIIPRISVQE |
Parental | PMQTGIKAVDSLVPIGRGQRELIIGDRQT-GKTSIAIDTIINQKRFNDGVDEKKKLYCIYVAIGQKRSTV |
PMQTGIKAV.SLVPIGRGQ.ELIIGDRQT.GK........INQK.FNDG.DEKKKLYCIYVAIGQKRSTV | |
Retrocopy | PMQTGIKAVESLVPIGRGQCELIIGDRQT>GKLQLPLT--INQKQFNDGTDEKKKLYCIYVAIGQKRSTV |
Parental | AQLVKRLTDADAMKYTIVVSATASDAAPLQYL |
AQLVKRLTD..AMKYTIV.SATASDAA.LQ.L | |
Retrocopy | AQLVKRLTDSHAMKYTIVLSATASDAARLQWL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |