Parental gene:

ENSCAFG00000017648

Aliases:None
Description:ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:E2RNG2]
Organism:Dog (Canis familiaris)
Coordinates:7:45118241..45127224(+)


>ENSCAFG00000017648
ATGCTGTCCGTGCGCGTCGCCGCGGCCGTGGCCCGCGCCCTCCCTCGGCGGGCCGGGCTGGTCTCCAAAAATGCTTTGGG
ATCATCCTTCATTGCTGCAAGGAACCTCCATGCCTCTAACACTTGTCTTCAGAAGACTGGCACTGCTGAAGTGTCCTCTA
TCCTTGAAGAGCGTATTCTGGGAGCTGATACCTCTGTCGACCTTGAAGAGACTGGGCGTGTCCTAAGCATTGGGGATGGT
ATTGCCCGTGTACATGGGCTGAGAAATGTTCAGGCAGAAGAAATGGTAGAGTTTTCTTCAGGCTTAAAGGGTATGTCTCT
GAACTTGGAACCTGACAATGTTGGTGTTGTCGTGTTTGGAAATGATAAACTAATTAAGGAAGGAGATATCGTGAAAAGAA
CAGGAGCCATTGTGGACGTTCCAGTTGGCGAGGAGCTGTTGGGCCGTGTTGTAGATGCCCTTGGTAATGCCATCGATGGA
AAGGGTCCAGTTGGTTCCAAGACCCGTAGGCGAGTTGGCCTGAAAGCCCCTGGGATCATTCCTCGAATCTCTGTGCGTGA
ACCCATGCAGACTGGCATCAAGGCTGTGGATAGCTTGGTGCCAATTGGTCGTGGTCAGCGTGAGCTGATTATTGGTGACC
GGCAAACTGGCAAAACATCAATTGCTATTGACACAATCATTAATCAGAAACGTTTCAATGACGGAACTGATGAAAAGAAG
AAGCTATACTGTATCTACGTTGCTATTGGTCAGAAGAGATCTACGGTTGCCCAGTTGGTGAAGAGACTTACAGATGCAGA
TGCCATGAAGTACACCATTGTGGTGTCAGCTACTGCTTCTGATGCTGCTCCACTTCAGTACCTGGCTCCTTATTCTGGCT
GTTCCATGGGAGAATATTTTAGAGATAATGGCAAACATGCTTTGATCATCTATGATGACTTATCCAAACAGGCTGTTGCT
TATCGTCAGATGTCTCTGCTGCTCCGCCGGCCCCCTGGTCGTGAAGCCTATCCTGGTGATGTGTTCTACCTACACTCCCG
TCTGCTAGAGAGAGCAGCCAAAATGAACGATTCTTTTGGTGGTGGTTCCTTGACTGCTTTACCAGTCATAGAAACGCAAG
CTGGTGATGTGTCTGCTTACATTCCAACAAATGTCATTTCCATCACTGATGGACAGATTTTCTTGGAAACAGAATTGTTC
TACAAAGGTATCCGCCCTGCCATTAACGTCGGTTTGTCTGTGTCCCGTGTTGGATCTGCTGCCCAAACCAGGGCCATGAA
GCAGGTGGCAGGTACCATGAAGCTGGAATTGGCTCAGTATCGTGAGGTTGCTGCTTTTGCCCAGTTCGGTTCTGACCTTG
ATGCTGCCACTCAGCAGCTCTTGAGTCGTGGCGTGCGATTGACTGAGTTGCTGAAGCAAGGACAATATTCTCCCATGGCT
ATTGAAGAACAAGTGGCTGTTATTTATGCTGGTGTAAGAGGATATCTTGATAAATTGGAGCCCAGCAAGATCACAAAGTT
TGAGCATGCCTTCTTGGCTCATGTTATCAGCCAGCACCAAGCCCTCTTGGGCAATATAAGGACCGATGGAAAGATCTCAG
AACAGTCAGATGCTAAGCTGAAAGAGATTGTAACAAACTTCTTGGCTGGATTTGAAGCTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 394 .33 RPM
SRP017611_brain 395 .22 RPM
SRP017611_kidney 1120 .78 RPM
SRP017611_liver 274 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002507 ortholog_one2many 2 retrogenes
retro_btau_1380, retro_btau_1426,
Dasypus novemcinctus ENSDNOG00000006331 ortholog_one2many 2 retrogenes
retro_dnov_1740, retro_dnov_2525,
Equus caballus ENSECAG00000021561 ortholog_one2many 1 retrogene
retro_ecab_788,
Homo sapiens ENSG00000152234 possible_ortholog 1 retrogene
retro_hsap_1702,
Gorilla gorilla ENSGGOG00000016560 possible_ortholog 1 retrogene
retro_ggor_1275,
Macropus eugenii ENSMEUG00000009770 possible_ortholog 1 retrogene
retro_meug_151,
Meleagris gallopavo ENSMGAG00000009963 possible_ortholog 1 retrogene
retro_mgal_14,
Microcebus murinus ENSMICG00000017500 ortholog_one2many 1 retrogene
retro_mmur_1210,
Myotis lucifugus ENSMLUG00000009856 possible_ortholog 1 retrogene
retro_mluc_1198,
Macaca mulatta ENSMMUG00000003570 possible_ortholog 1 retrogene
retro_mmul_1208,
Mustela putorius furo ENSMPUG00000000923 ortholog_one2one 1 retrogene
retro_mputfur_601,
Nomascus leucogenys ENSNLEG00000010973 possible_ortholog 1 retrogene
retro_nleu_1334,
Oryctolagus cuniculus ENSOCUG00000003967 possible_ortholog 1 retrogene
retro_ocun_1235,
Otolemur garnettii ENSOGAG00000026684 possible_ortholog 1 retrogene
retro_ogar_2623,
Pongo abelii ENSPPYG00000009130 possible_ortholog 1 retrogene
retro_pabe_1363,
Pan troglodytes ENSPTRG00000009991 possible_ortholog 1 retrogene
retro_ptro_1151,
Sarcophilus harrisii ENSSHAG00000017177 possible_ortholog 1 retrogene
retro_shar_109,
Tarsius syrichta ENSTSYG00000007804 possible_ortholog 1 retrogene
retro_tsyr_1186,
Tursiops truncatus ENSTTRG00000005118 ortholog_one2many 1 retrogene
retro_ttru_159,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_516 86.84 61.30
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_1483 88.37 65.10
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000017648 retrocopies