RetrogeneDB ID: | retro_mluc_1291 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429815:4797359..4797654(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000029131 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AGPAT2 | ||
Ensembl ID: | ENSMLUG00000007348 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.84 % |
Parental protein coverage: | 52.13 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | FFINRQRSSTAMSVMADVGELMTRENLKVWIYPEGTRNDNGDLLPF-KKGAFYLAVQAQVPIVPVVYSSF |
F..NRQRSSTAMSVMADVGELMTRENLKVWIYPEGTRNDNGDLLPF.KKGAFYLAVQAQVP.VPVVYSSF | |
Retrocopy | FLLNRQRSSTAMSVMADVGELMTRENLKVWIYPEGTRNDNGDLLPF>KKGAFYLAVQAQVPSVPVVYSSF |
Parental | SSFYNPRTKLFTSGSARAPRRGQFPLPGL |
SSFYN.RTKLFTSG......R...P..GL | |
Retrocopy | SSFYNTRTKLFTSGTIKVEVRDAIPTSGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Myotis lucifugus | ENSMLUG00000007348 | 2 retrocopies |
retro_mluc_1291 , retro_mluc_968,
|
Ochotona princeps | ENSOPRG00000003291 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000023422 | 1 retrocopy |