RetrogeneDB ID: | retro_mluc_2152 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430063:587767..588691(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000025820 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000012093 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.19 % |
Parental protein coverage: | 62.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | RERVWRTRTTILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQE |
RERV.RTR.TILQS.GK.F.K..FAILQSV.ARE.G.AP..RPAP.AAP..PTL.T.QPIPAAY.RYDQE | |
Retrocopy | RERVGRTRMTILQSKGKAFAKDVFAILQSVEAREKGPAPQKRPAPRAAPAAPTLPTTQPIPAAYDRYDQE |
Parental | RFKGKEETEGFKIDTMGTYHGMTLKSVT-EGASARKTQTPAAQ--PVPRPVSQARPPPNQKKGSRTPIII |
RFK.K.ET.GF.IDTMGTYHG.TL.SVT.EGA..R.TQTPAAQ..PVPRPVSQARPPPNQKKGSRTPIII | |
Retrocopy | RFKRKQETGGFHIDTMGTYHGKTLESVTLEGAATRDTQTPAAQPVPVPRPVSQARPPPNQKKGSRTPIII |
Parental | IPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTALSVTVPYRVVDQPLK |
IPAA.TSLITMLNAKDLLQDL.FVPSDEKKKQ.C.RENETLIQRRKD..QP.GTAL..TVPYRVVDQPLK | |
Retrocopy | IPAAATSLITMLNAKDLLQDLTFVPSDEKKKQSCRRENETLIQRRKDRVQPRGTALGLTVPYRVVDQPLK |
Parental | LMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHK |
L.PQDWD.VVAVFV.GPAWQFKGWPWLLPDGSPVD.FAKIKAFHLKY..V.LD..VQKW..TVLELSY.. | |
Retrocopy | LTPQDWDQVVAVFVHGPAWQFKGWPWLLPDGSPVDVFAKIKAFHLKYEHVPLDASVQKWNITVLELSYYQ |
Parental | RHLDRPVFLRFWETLDRYMVKHKSHLRF |
.H.DR..FL.FW.TLD.YM..HKSHLRF | |
Retrocopy | HHSDRLLFLSFWDTLDSYMARHKSHLRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000008675 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000012093 | 2 retrocopies |
retro_mluc_1439, retro_mluc_2152 ,
|
Monodelphis domestica | ENSMODG00000012222 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000018050 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000016332 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000000351 | 1 retrocopy |