RetrogeneDB ID: | retro_mluc_2318 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430200:580444..580871(-) | ||
Located in intron of: | ENSMLUG00000011201 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ORMDL1 | ||
Ensembl ID: | ENSMLUG00000014339 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.21 % |
Parental protein coverage: | 94.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | VNPNTRVMNSRG-IWLTYALGVGLLHIVLLSIPFFSV-PVAW-TLTNVIHNLG-MYVFLHAVKGTPFETP |
.NPNTR.M.S.G..WLT.ALG.GLL.IVLLSIPFFSV...AW...T.VI..LG.MYVFLHAVKGTPFETP | |
Retrocopy | MNPNTRAMDSQG<MWLTHALGIGLLQIVLLSIPFFSV<SAAW<ASTHVICKLG<MYVFLHAVKGTPFETP |
Parental | DQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHFMLNTASLLSVLIPKVPQLHGV |
.QG.ARLLT.WEQLDYGVQFTSSRKFFTISPIILYFLAS.YTKY..THFMLNTASLLSVL.PKVPQLHGV | |
Retrocopy | GQGKARLLTPWEQLDYGVQFTSSRKFFTISPIILYFLASCYTKYALTHFMLNTASLLSVLVPKVPQLHGV |
Parental | RI-FGINKY |
.I.FGINKY | |
Retrocopy | WI<FGINKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000005579 | 1 retrocopy | |
Homo sapiens | ENSG00000128699 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000015259 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000007769 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000003575 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014339 | 1 retrocopy |
retro_mluc_2318 ,
|
Macaca mulatta | ENSMMUG00000014316 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000006625 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000013017 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000012736 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000016044 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000012942 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000005240 | 2 retrocopies |