RetrogeneDB ID: | retro_mluc_2330 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430221:132713..132975(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNX24 | ||
Ensembl ID: | ENSMLUG00000009392 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.83 % |
Parental protein coverage: | 59.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | EVLMNGRK-HFVEKRYSEFHALHKKLKKCIKTPEIPSKHVRNWV-PKV-LEQRRQGLETYLQAVILENEE |
EVLMNG.K..FVE..Y..FH.L.KKLKKCIKTPEI.SKHVRNW..PKV.LE..RQGLETYLQAVILEN.E | |
Retrocopy | EVLMNGEK>YFVEENYNKFHTLYKKLKKCIKTPEILSKHVRNWT<PKV<LE*LRQGLETYLQAVILENAE |
Parental | LPKLFLD-FLNIRHLPSLPKAE |
LPKLFLD.FL....L.S.P.A. | |
Retrocopy | LPKLFLD<FLSVWQLTSMPEAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000031069 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000006859 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000019810 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000010310 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000001708 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009392 | 2 retrocopies |
retro_mluc_1022, retro_mluc_2330 ,
|
Monodelphis domestica | ENSMODG00000013427 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000005170 | 2 retrocopies | |
Sorex araneus | ENSSARG00000009785 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000011329 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000014395 | 2 retrocopies |