RetrogeneDB ID: | retro_mluc_2386 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430287:452603..453073(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000014729 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UTP11L | ||
Ensembl ID: | ENSMLUG00000001003 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.39 % |
Parental protein coverage: | 62.45 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SRQREHRERSQPGFRKHLGLLEKKKDYKLRANDYRKKQEYLRALRKKALEKNPDEFYYKMTRVKLQDGVH |
SRQ.EH.ERSQPGFRKHLGLLEKKKDYKLRAND..KKQEYLRALRKKALEKNPDEFYYKMTRVKL.DGVH | |
Retrocopy | SRQLEHQERSQPGFRKHLGLLEKKKDYKLRANDSWKKQEYLRALRKKALEKNPDEFYYKMTRVKLHDGVH |
Parental | VIPQTKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIER-LKSELHLLDFQGKQQNKHVFFFDTKKEVERF |
VIP.TKEEVTPEQLKL.RTQDVKYIEMKRVAEAK.I.R..KS..........Q.....FF.DTKKEVERF | |
Retrocopy | VIPETKEEVTPEQLKLGRTQDVKYIEMKRVAEAKEIKR<TKSSTCWISRGKQQNKHVFFF-DTKKEVERF |
Parental | DIATHLRTAPELVDRVFNR |
DIAT.LRTAPELVDRVFNR | |
Retrocopy | DIATRLRTAPELVDRVFNR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000001043 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000001496 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000001003 | 1 retrocopy |
retro_mluc_2386 ,
|
Mus musculus | ENSMUSG00000028907 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000007154 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000016492 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000007174 | 1 retrocopy |