RetrogeneDB ID: | retro_mmur_201 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_1698:279191..279754(-) | ||
Located in intron of: | ENSMICG00000010934 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSMICG00000002961 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 68.39 % |
Parental protein coverage: | 64.36 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 5 |
Parental | VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRAS-ITPG-TVLIILTGRHRGKRV |
.GGDKNGGT.VVKL.KMPRYYP.E.VP.KL..HGK.KPF..HVR.L.AS...PG...LIILTGRHRGKR. | |
Retrocopy | IGGDKNGGTWVVKLHKMPRYYPAEYVPLKLWNHGK>KPFGLHVRKLQASLVLPG<MLLIILTGRHRGKRM |
Parental | VFLKQL-GSGLLLVT-GPLTLNRVPLRRTHQKFVIATT-TKIDISNVKIPKHLTDAYFKKKKLRKPRHQE |
VFL.....S..LL.T..PL.LN...L.RTHQKFVI.....KI.ISNV.IPKHLTDAYFKKK.L.K.RHQE | |
Retrocopy | VFLLEV>PSSGLLLTTRPLVLN*GLLQRTHQKFVITYE<RKIYISNV*IPKHLTDAYFKKK*LQKSRHQE |
Parental | GEIFDTE-KEKYEITEHRKVDQKAVDSQILPKIKAIPQLQGYLRSLFALTNGI |
GE.F.TE.KEKYE..E..KVD.KA.DSQIL.KI..IPQLQGYL.S.FALTN.. | |
Retrocopy | GEVFNTE<KEKYETIEQHKVDHKAMDSQILLKINTIPQLQGYLQSVFALTNSL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |