RetrogeneDB ID: | retro_mputfur_1244 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897052.1:3840088..3840624(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MTFR1 | ||
Ensembl ID: | ENSMPUG00000009909 | ||
Aliases: | None | ||
Description: | mitochondrial fission regulator 1 [Source:HGNC Symbol;Acc:29510] |
Percent Identity: | 65.03 % |
Parental protein coverage: | 54.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | SMQSVL--WSGKPYGSSRSIVRKIGTNLSLIQCPRVQFQLTSPTTEWSPNHLGEDAVVSFADVGWVAKEE |
SM.SVL..W.G.PYGSSR.I..K.GTNLS...CPRVQFQLT.PTTEWS.N....D.VVSFADVG.VAKEE | |
Retrocopy | SMRSVLMLWFGRPYGSSRCILSKTGTNLSRMRCPRVQFQLTGPTTEWSHNRPEKDVVVSFADVGQVAKEE |
Parental | GECSTRQRT-EVRSRQPLQDDLPFFEKPPSRQFSLPNLSPEDPQQKTALANEEALQKICALENE-LAALR |
G.C.TR..T..VR.RQPLQDDLPFFEKPPSR.FSL.NLS.EDP..K.ALANEEALQKIC..E....A... | |
Retrocopy | GKCLTRGPT<RVRPRQPLQDDLPFFEKPPSR*FSLSNLSLEDPHLKIALANEEALQKICP*ERT>VALRT |
Parental | AQIA-KIVTLQEQQNLITGDLEPATSV-TTPPSSIPPPPPPPP |
AQIA.K......Q.NLI..DL...TSV.T..P...PP..P.PP | |
Retrocopy | AQIA>KLTLQEQQ-NLIAIDLDSVTSV>TAAPPLVPPLSPSPP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000012281 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000006664 | 3 retrocopies | |
Dipodomys ordii | ENSDORG00000016322 | 1 retrocopy | |
Homo sapiens | ENSG00000066855 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000011263 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000009909 | 2 retrocopies |
retro_mputfur_1244 , retro_mputfur_894,
|
Oryctolagus cuniculus | ENSOCUG00000008165 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000018631 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000021359 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000010102 | 1 retrocopy |