RetrogeneDB ID: | retro_mputfur_1255 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897056.1:1808656..1809557(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000006958 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.89 % |
Parental protein coverage: | 68.47 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | REIVHLQAGQCGNQIGAKFW-EVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEP |
R.I..LQA.QC.NQI.AKF...VISD.HGID....YH..SD..LE.I..Y.....GGN.VP..VLVDLE. | |
Retrocopy | RKILPLQASQCRNQIRAKFG<KVISDKHGIDIASIYHSESDPKLEQIE-YSKNTAGGNCVPCTVLVDLEL |
Parental | GTMDSVRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSL |
GTM.S...G.P.G.....DN...GQS.....WAKGHYTEG.EL....L.VVRK....CDCLQGFQLTHS. | |
Retrocopy | GTMVSLCLG>PLGK--SSDNMASGQSYT-EQWAKGHYTEGEELINSGLEVVRKKC*ICDCLQGFQLTHSP |
Parental | GGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTD-ETYCIDNEALY |
G..T..GMGTL.IS.I.E..PD.IMNTFSV.PS....D.VVEPY...LS.H.L..N.D.E.Y.IDN.A.Y | |
Retrocopy | GRVTEPGMGTLFISNIGEVCPDGIMNTFSVAPSSNWWDRVVEPYDVMLSAHWLIDNPD>ESYWIDNKAPY |
Parental | DICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS |
DICF.TLKLTTPT.GD.NHLVSATMSGVT.CL.FPGQLNAD..KLA.N.V..P.L.F.MPGF.PLTS..S | |
Retrocopy | DICFGTLKLTTPTHGDDNHLVSATMSGVTRCLPFPGQLNADPYKLAINRVLCP*LQFCMPGFTPLTSWSS |
Parental | QQYRALTVPELTQQMFDSKNMMAACDP |
QQY.ALTV..LTQ..FD.KN..A...P | |
Retrocopy | QQYMALTVAKLTQHVFDAKNITATT*P |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Homo sapiens | ENSG00000104833 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000015607 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000006958 | 1 retrocopy |
retro_mputfur_1255 ,
|
Mustela putorius furo | ENSMPUG00000011690 | 3 retrocopies |