RetrogeneDB ID: | retro_mputfur_1459 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897145.1:934942..935195(-) | ||
Located in intron of: | ENSMPUG00000000093 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LYRM4 | ||
Ensembl ID: | ENSMPUG00000000532 | ||
Aliases: | None | ||
Description: | LYR motif containing 4 [Source:HGNC Symbol;Acc:21365] |
Percent Identity: | 63.53 % |
Parental protein coverage: | 92.31 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAASSRAQVLDLYRAMLRESKHFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLGIIR-RQ |
MAAS...Q.L.LY..M.RESKHFS.YNY.TY.VRRI...FRE.KNVKDP.EIQ.LVNK.K.D.G.I.... | |
Retrocopy | MAASNCTQLLVLY*VMQRESKHFSTYNYGTYIVRRIKHGFREAKNVKDPIEIQTLVNKVKGDIGTIH>DP |
Parental | VLIGQMYSTDKLIIE |
V...Q.Y.TDKLII. | |
Retrocopy | VYFSQLYLTDKLIIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000031432 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000021370 | 1 retrocopy | |
Homo sapiens | ENSG00000214113 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000005958 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000028065 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000532 | 1 retrocopy |
retro_mputfur_1459 ,
|
Mus musculus | ENSMUSG00000046573 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000011472 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000047970 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000007073 | 1 retrocopy |