RetrogeneDB ID: | retro_mputfur_1547 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897228.1:253816..254161(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM96B | ||
Ensembl ID: | ENSMPUG00000005303 | ||
Aliases: | None | ||
Description: | family with sequence similarity 96, member B [Source:HGNC Symbol;Acc:24261] |
Percent Identity: | 93.04 % |
Parental protein coverage: | 68.86 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMD |
LIRSIND.EHPLTLEELNVVEQVRVQVS.PESTVAVAFTPTIPHCSMATLIGLSIKVKLL.SLPQRFKMD | |
Retrocopy | LIRSINDLEHPLTLEELNVVEQVRVQVSNPESTVAVAFTPTIPHCSMATLIGLSIKVKLL*SLPQRFKMD |
Parental | VHITPGTHASEHAVNKQLADKERVAAALENTHLLEVVNQCLSARS |
.H.TPGTHA.EHAVNKQLADKE.VAAAL.NTHLLEVVNQCLSARS | |
Retrocopy | AHTTPGTHALEHAVNKQLADKEWVAAALANTHLLEVVNQCLSARS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017164 | 1 retrocopy | |
Bos taurus | ENSBTAG00000013931 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000020394 | 2 retrocopies | |
Felis catus | ENSFCAG00000029216 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000000605 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000005303 | 2 retrocopies |
retro_mputfur_1547 , retro_mputfur_302,
|
Mus musculus | ENSMUSG00000031879 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000004698 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000005006 | 2 retrocopies |