RetrogeneDB ID: | retro_mputfur_190 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | AEYP01110452.1:4104..4534(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSMPUG00000012729 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 59.03 % |
Parental protein coverage: | 98.58 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KFNPFVTLDRSKNRKRHFNAPS-VRRKIMSSPL-KELRQKYNIRSMPIRKDDDVQMVRGHYKGQQIGKVV |
K.NPFVT.D.SK..KRHF.APS..RRKIMSS.L.KEL.QKYN..S.P...DD.VQ.V.GH.K.Q...... | |
Retrocopy | KLNPFVTSDLSKKQKRHFSAPSHTRRKIMSSCLSKELTQKYNPSSVPT*RDDEVQVVPGHDKSQPANWQS |
Parental | QVHR-KKYVIYIEQVQHEKANGTTVHVGIHPSKVVITRLKLDKDWKKIL--KRKSRQVGKEKGKYKEELL |
..H..KK..IYIE.VQ.EK.NG..VHVGIHPSKV..TRLKLDK..K.I......S.QVGKE..K.KEE.L | |
Retrocopy | CLHL>KK*IIYIE*VQREKVNGMNVHVGIHPSKVATTRLKLDKTLKMIFEGQARSHQVGKENWKCKEETL |
Parental | EKMQ |
.... | |
Retrocopy | ARQR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000002289 | 35 retrocopies |
retro_dnov_1106, retro_dnov_1147, retro_dnov_1171, retro_dnov_1258, retro_dnov_1304, retro_dnov_1319, retro_dnov_1344, retro_dnov_1381, retro_dnov_1501, retro_dnov_1676, retro_dnov_1819, retro_dnov_1959, retro_dnov_2039, retro_dnov_2041, retro_dnov_2061, retro_dnov_2078, retro_dnov_2103, retro_dnov_2116, retro_dnov_2121, retro_dnov_2287, retro_dnov_2297, retro_dnov_2438, retro_dnov_2545, retro_dnov_2580, retro_dnov_2632, retro_dnov_300, retro_dnov_306, retro_dnov_467, retro_dnov_646, retro_dnov_666, retro_dnov_681, retro_dnov_760, retro_dnov_850, retro_dnov_970, retro_dnov_985,
|
Felis catus | ENSFCAG00000026949 | 1 retrocopy | |
Latimeria chalumnae | ENSLACG00000007599 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000009799 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000007988 | 12 retrocopies | |
Mustela putorius furo | ENSMPUG00000012729 | 2 retrocopies |
retro_mputfur_1624, retro_mputfur_190 ,
|