Parental gene: | RPL26L1, ENSDNOG00000002289 |
| Aliases: | None |
| Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1975:109858..115241(+) |
>ENSDNOG00000002289
ATGAAGTTCAACCCCTTTGTGACCTCGGACCGCAGCAAGAACCGCAAACGCCACTTCAATGCCCCTTCGCACGTACGAAG
GAAGATCATGTCGTCCCCACTCTCCAAGGAGCTGCGGCAGAAATACAACGTTCGCTCCATGCCCATCCGCAAGGACGACG
AGGTCCAGGTGGTTCGAGGACACTACAAAGGTCAGCAGATTGGCAAGGTAGTCCAGGTGTACAGAAAGAAATACGTCATC
TACATTGAGAGGGTGCAGCGTGAGAAGGCTAATGGCACCACTGTCCATGTGGGCATTCACCCAAGCAAGGTGGTTATCAC
CAGGCTAAAACTGGACAAAGATCGGAAAAAAATTCTTGAACGCAAAGCCAAATCTCGACAAGTTGGAAAGGAAAAAGGCA
AATATAAGGAAGAACTTATTGAAAAAATGCAGGAATGA
ATGAAGTTCAACCCCTTTGTGACCTCGGACCGCAGCAAGAACCGCAAACGCCACTTCAATGCCCCTTCGCACGTACGAAG
GAAGATCATGTCGTCCCCACTCTCCAAGGAGCTGCGGCAGAAATACAACGTTCGCTCCATGCCCATCCGCAAGGACGACG
AGGTCCAGGTGGTTCGAGGACACTACAAAGGTCAGCAGATTGGCAAGGTAGTCCAGGTGTACAGAAAGAAATACGTCATC
TACATTGAGAGGGTGCAGCGTGAGAAGGCTAATGGCACCACTGTCCATGTGGGCATTCACCCAAGCAAGGTGGTTATCAC
CAGGCTAAAACTGGACAAAGATCGGAAAAAAATTCTTGAACGCAAAGCCAAATCTCGACAAGTTGGAAAGGAAAAAGGCA
AATATAAGGAAGAACTTATTGAAAAAATGCAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 12 .64 RPM |
| SRP012922_cerebellum | 13 .33 RPM |
| SRP012922_heart | 5 .34 RPM |
| SRP012922_kidney | 10 .68 RPM |
| SRP012922_liver | 6 .04 RPM |
| SRP012922_lung | 16 .04 RPM |
| SRP012922_quadricep_muscle | 9 .17 RPM |
| SRP012922_spleen | 13 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011270 | possible_ortholog | 7 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000002470 | within_species_paralog | 3 retrogenes | |
| Felis catus | ENSFCAG00000026949 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000037241 | ortholog_one2one | 2 retrogenes | |
| Latimeria chalumnae | ENSLACG00000007599 | ortholog_many2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011312 | ortholog_one2one | 10 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009799 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003070 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012729 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006172 | ortholog_one2one | 4 retrogenes | |
| Procavia capensis | ENSPCAG00000002246 | ortholog_one2one | 10 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003253 | ortholog_one2one | 8 retrogenes | |
| Sus scrofa | ENSSSCG00000016989 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000026876 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001655 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010624 | ortholog_one2one | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_300 | 63.76 | 99.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_306 | 84.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_467 | 74.44 | 91.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_646 | 87.50 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_666 | 91.10 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_681 | 88.19 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_760 | 60.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_850 | 84.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_970 | 90.24 | 84.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_985 | 70.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_1106 | 71.76 | 88.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_1147 | 88.97 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_1171 | 86.11 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_1258 | 81.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_dnov_1304 | 90.97 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_dnov_1319 | 76.15 | 72.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_dnov_1344 | 73.64 | 87.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_dnov_1381 | 97.54 | 84.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_dnov_1501 | 86.99 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_dnov_1676 | 84.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_dnov_1819 | 77.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_dnov_1959 | 88.89 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_dnov_2039 | 70.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_dnov_2041 | 75.00 | 84.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_dnov_2061 | 86.96 | 94.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_dnov_2078 | 88.97 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_dnov_2103 | 79.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_dnov_2116 | 81.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_dnov_2121 | 91.03 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_dnov_2287 | 88.89 | 99.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_dnov_2297 | 91.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_dnov_2438 | 70.00 | 88.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_dnov_2545 | 62.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_dnov_2580 | 84.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_dnov_2632 | 86.84 | 78.62 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002289 retrocopies