RetrogeneDB ID: | retro_mputfur_524 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896917.1:9642369..9642669(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LZIC | ||
Ensembl ID: | ENSMPUG00000016545 | ||
Aliases: | None | ||
Description: | leucine zipper and CTNNBIP1 domain containing [Source:HGNC Symbol;Acc:17497] |
Percent Identity: | 76.47 % |
Parental protein coverage: | 52.63 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SQAFKTPEVIRLFA-KKQPGQLRTRLAEMDRDLMVGKLDRGLYMQQKV-EILTALRKLGEKLTADDEAFL |
.QAF.TPEVIRL...KKQ.GQL.TRLAEMDRDL.V.KL.RGLY.QQK..EILTALR..G.KL..D.EAFL | |
Retrocopy | NQAF*TPEVIRLLE<KKQTGQLQTRLAEMDRDLVVVKLERGLYSQQKG>EILTALRTCGGKLSTDGEAFL |
Parental | SANAGAILSQFEKVSTDLGSGDKVLALASFEV |
SANA.A.L.QFEKVS.DLGSGDKVLALAS.EV | |
Retrocopy | SANAAALLGQFEKVSPDLGSGDKVLALASSEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000004171 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000011633 | 1 retrocopy | |
Felis catus | ENSFCAG00000023559 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000016545 | 2 retrocopies |
retro_mputfur_336, retro_mputfur_524 ,
|