RetrogeneDB ID: | retro_nleu_1422 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397292.1:13997368..13997971(-) | ||
Located in intron of: | ENSNLEG00000003938 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RIMKLB | ||
Ensembl ID: | ENSNLEG00000002201 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.56 % |
Parental protein coverage: | 52.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | NGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDT |
.G.LI.AYPQVVVVRVPTPWVQSDSDITVLR.LEKMGCRLMNRPQAILNC.NKFWTFQELAGHGVPLPDT | |
Retrocopy | SGHLI-AYPQVVVVRVPTPWVQSDSDITVLRRLEKMGCRLMNRPQAILNCINKFWTFQELAGHGVPLPDT |
Parental | FSYGGHENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKAPFGLISHLIRHEAPYLFQKYVKESHGR |
FS.GGHENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDK......SHLIRHEAPYLFQKYVKESHGR | |
Retrocopy | FSHGGHENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGR |
Parental | DVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGID |
DV.VIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGID | |
Retrocopy | DVCVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGID |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Gorilla gorilla | ENSGGOG00000000332 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002201 | 2 retrocopies |
retro_nleu_1422 , retro_nleu_1437,
|
Rattus norvegicus | ENSRNOG00000023814 | 1 retrocopy |