RetrogeneDB ID: | retro_nleu_2034 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397324.1:1846731..1847119(+) | ||
Located in intron of: | ENSNLEG00000001573 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RGS10 | ||
Ensembl ID: | ENSNLEG00000016735 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.93 % |
Parental protein coverage: | 72.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | IHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFR-EFLKKEFSEENVLFWLACED-FKKMQDKTQ |
IHDS..SS.SSHQSLKSTAKW...LENLLED.EG.KR.R.EFLKK.F.EEN.LFWLAC.D.F.......Q | |
Retrocopy | IHDSNSSSGSSHQSLKSTAKWVTFLENLLEDLEGMKRLR<EFLKKIFNEENILFWLACKD<FLFLMPHKQ |
Parental | MQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILEEPHPLMFQKLQDQIFNLMKYDSYSRFLK |
.QEKAKE.YMTFLSSKASS.V....QS.LNEKILEEPHPLMFQ.LQD.IFNL.KY.SYS..LK | |
Retrocopy | IQEKAKEVYMTFLSSKASS*VK-KRQSSLNEKILEEPHPLMFQELQDWIFNLTKYNSYSSCLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Gorilla gorilla | ENSGGOG00000008414 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000021610 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000016735 | 1 retrocopy |
retro_nleu_2034 ,
|
Procavia capensis | ENSPCAG00000003150 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000002702 | 1 retrocopy |