RetrogeneDB ID: | retro_ogar_1745 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873563.1:6682818..6683351(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | METTL9 | ||
Ensembl ID: | ENSOGAG00000008169 | ||
Aliases: | None | ||
Description: | methyltransferase like 9 [Source:HGNC Symbol;Acc:24586] |
Percent Identity: | 78.33 % |
Parental protein coverage: | 63.25 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGS-MFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEV |
KS.WLFIQLYHSFVSSVFSLFM.RTSINGLLGR.S.MFVFSPDQF.R.LKIN...KTHRLLDLGA.DGEV | |
Retrocopy | KSCWLFIQLYHSFVSSVFSLFMFRTSINGLLGRNS<MFVFSPDQF*RRLKINHKSKTHRLLDLGARDGEV |
Parental | TKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVL |
.......F..IYA..LSETMIW.L.KKKYR.L.INEW.NT.FQYDV.SCL..LD...QPLTLLK.IRSVL | |
Retrocopy | -RNHKASF*RIYAIKLSETMIWKLHKKKYRILSINEWYNTEFQYDVTSCLKFLDCYNQPLTLLKGIRSVL |
Parental | EPTRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNW |
EPT.GRVILALVLPFHPYVEN.GGKW.KP.EILEIK.QNW | |
Retrocopy | EPTKGRVILALVLPFHPYVENTGGKWQKP*EILEIKKQNW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020564 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000016801 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004285 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008169 | 3 retrocopies |
retro_ogar_1745 , retro_ogar_307, retro_ogar_588,
|
Rattus norvegicus | ENSRNOG00000025940 | 1 retrocopy |