RetrogeneDB ID: | retro_ogar_3130 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873724.1:2235330..2235821(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DAZAP2 | ||
Ensembl ID: | ENSOGAG00000007977 | ||
Aliases: | None | ||
Description: | DAZ associated protein 2 [Source:HGNC Symbol;Acc:2684] |
Percent Identity: | 88.17 % |
Parental protein coverage: | 98.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | KGQYPTQPTYPVQPPGNPV-YPQTLHLPQ-APPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLY |
..QYPTQPTYPVQPPGNPV..PQT.HLP..APPYT.APPAYSELYR.SFVHPGAAT.PTMSAAFPGASLY | |
Retrocopy | QSQYPTQPTYPVQPPGNPV<VPQTRHLPR<APPYTHAPPAYSELYRQSFVHPGAATIPTMSAAFPGASLY |
Parental | LPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGSIPPPPPGCPPNAAQLAV |
LPMAQSVAVGP.GSTIP.AYYPVGPIYPPGS.VLVEGGYDAG.RFGAGA.AGSIPPPPPGCPPNAAQLAV | |
Retrocopy | LPMAQSVAVGPSGSTIPIAYYPVGPIYPPGSAVLVEGGYDAGSRFGAGAPAGSIPPPPPGCPPNAAQLAV |
Parental | MQ-GANVLVTQRK-GNFFMGGSDGGYTIW |
MQ.G.N.LVTQRK.G.FFMGGSDGGYTIW | |
Retrocopy | MQ<GINILVTQRK<GEFFMGGSDGGYTIW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000017661 | 2 retrocopies | |
Homo sapiens | ENSG00000183283 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000026861 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009959 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000001884 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000017776 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000007977 | 3 retrocopies |
retro_ogar_2109, retro_ogar_2139, retro_ogar_3130 ,
|
Pongo abelii | ENSPPYG00000004524 | 1 retrocopy |