RetrogeneDB ID: | retro_tbel_3271 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_135567:37584..38324(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000003474 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.6 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | LNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEE-WKGYVVRISGGNDKQGFPMKQGVLTHG |
LNISFPATG..KLIEVD.E.KL..FYEK.MATEVA.D.LGEE..KGYV..ISGGNDKQGFP.KQG.LTH. | |
Retrocopy | LNISFPATGFRKLIEVDTECKLCIFYEKHMATEVAVDTLGEE<MKGYVG*ISGGNDKQGFPIKQGILTHV |
Parental | RVRLLL-SKGHSCYRPRRTGEKR-KSVRGCTVDANLSILNSVIVKK-EKNIPGLTDTTVPRHLGPKRASR |
R.RLLL..KGHSCYRPR.TG.....SV.GC..D..LS.LN.VI.KK.EK.IPGLTDTT.PR.LGPKRASR | |
Retrocopy | RDRLLL>GKGHSCYRPRSTGKSNCESVWGCIMDVSLSVLNLVIIKKGEKDIPGLTDTTMPRRLGPKRASR |
Parental | IPKLFNLSKEDDVRQYVVRKPLNKEGKNPRTKAPKIQCLVTPCVLQHKRWHTALKKQRTKKNKEEAADY- |
I.KLFNLSKEDDV.QYVVRKPLNKEGK.P.TKAPKIQCLVTPCVLQHKR...ALKKQRTKKNKEEAA.Y. | |
Retrocopy | IQKLFNLSKEDDVCQYVVRKPLNKEGKKPKTKAPKIQCLVTPCVLQHKRRRIALKKQRTKKNKEEAAEY< |
Parental | AQLLAKRMKEAKEKSQEQTVKRRRLSPLRASTSKSESSQK |
..LLAKRMK.AKEK.QEQ..KR.RLS.LR.STSKSE.SQK | |
Retrocopy | CKLLAKRMKKAKEKCQEQIAKRHRLSSLRTSTSKSEYSQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |