RetrogeneDB ID: | retro_tsyr_1120 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_3121:20392..21007(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000001982 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DDI2 | ||
Ensembl ID: | ENSTSYG00000002522 | ||
Aliases: | None | ||
Description: | DNA-damage inducible 1 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:24578] |
Percent Identity: | 78.05 % |
Parental protein coverage: | 50.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | FSSIAVPGTSNPR---QRQPPGAQQSHS-SPGEIASSPQGLDNPALLRDMLLANPHELSLLKERNPPLAD |
FS..A.PGTS..R...Q...P.A..SH....GE...S..GLD.PAL.R.MLL.NPH.LSLLKERNP.LAD | |
Retrocopy | FSGVAMPGTSSSRPQHQQRAPAAPLSHGLASGEKMASAEGLDSPALIRSMLLSNPHDLSLLKERNPSLAD |
Parental | ALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFG |
ALLSG.LE.FS.VL.EQQ..RA.REQER.RLFSADPFD.EAQAKIEE.IRQQNIEENM.IAMEEAPESFG | |
Retrocopy | ALLSGNLEMFSQVLMEQQRERALREQERLRLFSADPFDREAQAKIEEEIRQQNIEENMSIAMEEAPESFG |
Parental | QVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGIAKGVGTQKIIGRVHL |
QV.MLY.NCKVNGHP.KAFVDSGAQMTIMSQACAE.CNIMRLVDRRWAGIAKGVGTQ.IIGRVHL | |
Retrocopy | QVAMLYVNCKVNGHPLKAFVDSGAQMTIMSQACAEKCNIMRLVDRRWAGIAKGVGTQIIIGRVHL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |