RetrogeneDB ID: | retro_tsyr_1737 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_563557:349..643(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RNASEK | ||
Ensembl ID: | ENSTSYG00000006902 | ||
Aliases: | None | ||
Description: | ribonuclease, RNase K [Source:HGNC Symbol;Acc:33911] |
Percent Identity: | 60.61 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MASLLCCGPKLAACGIVL-SAWGVIMLIMLGIFFNVHSAVLIEDVPLTEKDFENGPQNIYSVYEQVSYNC |
.ASLL.CG.KLAACGI.L.SAWG.I.L.MLGIF.NVHSAVL.EDV...E...E..P........QVSYN. | |
Retrocopy | LASLLSCGRKLAACGITLISAWGAIRLTMLGIFLNVHSAVLVEDVH-RERF*EWPPEHLEHLCQQVSYNR |
Parental | FIAASLYLLLGAFSVCQIRLNKRKEYMVR |
FI...L.LLL..FS.CQ..LNKR.E..VR | |
Retrocopy | FITTGLDLLLRDFSFCQVQLNKRIECKVR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000004064 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000023883 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000006902 | 2 retrocopies |
retro_tsyr_1104, retro_tsyr_1737 ,
|