RetrogeneDB ID: | retro_tsyr_2177 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_99454:2592..3132(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BZW1 | ||
Ensembl ID: | ENSTSYG00000013638 | ||
Aliases: | None | ||
Description: | basic leucine zipper and W2 domains 1 [Source:HGNC Symbol;Acc:18380] |
Percent Identity: | 95.56 % |
Parental protein coverage: | 50.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETL |
MNNQKQQKPTLSGQ.FKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASG.KLDYRR.AETL | |
Retrocopy | MNNQKQQKPTLSGQCFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGTKLDYRRFAETL |
Parental | FDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLK |
FDILVAGGMLAPGGTLADDMMRTDVC.FAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLK | |
Retrocopy | FDILVAGGMLAPGGTLADDMMRTDVCMFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLK |
Parental | GFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEG |
GFSESERNKLAMLTG.LLANG.LNASILNSLY.EN.VKEG | |
Retrocopy | GFSESERNKLAMLTGILLANGILNASILNSLYDENPVKEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000003543 | 8 retrocopies | |
Microcebus murinus | ENSMICG00000003355 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000015000 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000009806 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000013638 | 2 retrocopies |
retro_tsyr_2177 , retro_tsyr_483,
|
Tursiops truncatus | ENSTTRG00000003639 | 1 retrocopy |