Parental gene: | ENSCHOG00000003543 |
| Aliases: | None |
| Description: | None |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_23688:7967..16947(+) |
>ENSCHOG00000003543
ATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTCAAAACTAGGAAAAGAGATGAAAAAGAGAGGTT
TGACCCTACTCAGTTTCAGGACTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAGCAGTAGCAAAGTTTC
TTGATGCTTCTGGAGCAAAACTTGATTATCGCCGATATGCAGAAACTCTCTTTGACATTCTGGTGGCTGGTGGAATGCTG
GCCCCAGGTGGTACACTGGCAGATGACATGATGCGTACAGATGTCTGTGTGTTCGCAGCACAAGAAGACCTAGAGACCAT
GCAAGCATTTGCTCAGGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTTAAAA
AGCTGCTGCTGTTCTTAAAAGGTTTTTCAGAGTCGGAAAGGAACAAGCTGGCTATGTTGACTGGTGTTCTTCTGGCTAAC
GGGACACTTAATGCATCCATCCTCAATAGCCTTTATAATGAGAATTTGGTTAAAGAAGGGGTTTCAGCAGCTTTTGCTGT
AAAGCTCTTTAAATCGTGGATAAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTCAGCATGGATAACA
GACTAATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACAAAGTATTTTACTGAGGCAGGCTTGAAAGAG
CTTTCCGAGTATGTTCGAAATCAGCAAACCATAGGAGCTCGAAAAGAGCTCCAGAAAGAACTTCAAGAACAGATGTCACG
TGGGGATCCATTTAAGGATATCATTTTGTATGTCAAGGAGGAGATGAAAAAAAACAACATTCATTTCATGAAAGCCTTCC
AGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTCCTGAGTGAAGAGCCCATTCTGAAGTGGTATAAAGATGCACATGTT
GCAAAAGGGAAAAGTGTCTTCCTTGAGCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTC
TGAAGCTGAAGAAGGTGACTGA
ATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTCAAAACTAGGAAAAGAGATGAAAAAGAGAGGTT
TGACCCTACTCAGTTTCAGGACTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAGCAGTAGCAAAGTTTC
TTGATGCTTCTGGAGCAAAACTTGATTATCGCCGATATGCAGAAACTCTCTTTGACATTCTGGTGGCTGGTGGAATGCTG
GCCCCAGGTGGTACACTGGCAGATGACATGATGCGTACAGATGTCTGTGTGTTCGCAGCACAAGAAGACCTAGAGACCAT
GCAAGCATTTGCTCAGGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTTAAAA
AGCTGCTGCTGTTCTTAAAAGGTTTTTCAGAGTCGGAAAGGAACAAGCTGGCTATGTTGACTGGTGTTCTTCTGGCTAAC
GGGACACTTAATGCATCCATCCTCAATAGCCTTTATAATGAGAATTTGGTTAAAGAAGGGGTTTCAGCAGCTTTTGCTGT
AAAGCTCTTTAAATCGTGGATAAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTCAGCATGGATAACA
GACTAATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACAAAGTATTTTACTGAGGCAGGCTTGAAAGAG
CTTTCCGAGTATGTTCGAAATCAGCAAACCATAGGAGCTCGAAAAGAGCTCCAGAAAGAACTTCAAGAACAGATGTCACG
TGGGGATCCATTTAAGGATATCATTTTGTATGTCAAGGAGGAGATGAAAAAAAACAACATTCATTTCATGAAAGCCTTCC
AGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTCCTGAGTGAAGAGCCCATTCTGAAGTGGTATAAAGATGCACATGTT
GCAAAAGGGAAAAGTGTCTTCCTTGAGCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTC
TGAAGCTGAAGAAGGTGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011878 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010449 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000082153 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016296 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000003355 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001653 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000015000 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012344 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000051223 | possible_ortholog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006929 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012791 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000008111 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013638 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003639 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_689 | 84.36 | 77.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_726 | 97.56 | 81.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_838 | 79.43 | 58.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1519 | 83.46 | 73.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2060 | 68.31 | 79.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_2092 | 74.58 | 81.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_2451 | 82.73 | 78.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_2517 | 83.79 | 81.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000003543 retrocopies