RetrogeneDB ID: | retro_tsyr_305 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_7706:4372..4670(+) | ||
Located in intron of: | ENSTSYG00000012549 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LAMTOR5 | ||
Ensembl ID: | ENSTSYG00000006011 | ||
Aliases: | None | ||
Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955] |
Percent Identity: | 71.84 % |
Parental protein coverage: | 61.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | GSEPVWTEDGMEATLEQHLEDTMKNPSIVGVLCTD-SQGLNLGCRG-TLSDEHAGVISVLAQQAAKLTSD |
GS.P.W.E.G..A.L.QHLED..KNPS.VGVL.T..SQG.NLGC.G.T.SDEHAGVISVLAQ..AKLTS. | |
Retrocopy | GSGPGWKEGG-RAPLKQHLEDKRKNPSCVGVLRTA<SQGHNLGCCG<TMSDEHAGVISVLAQHTAKLTSE |
Parental | PTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS |
..D.P.VCLES.N.NIMIQK.DGITVA.HKMAS | |
Retrocopy | SSDVPMVCLESENRNIMIQKDDGITVAGHKMAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |