Parental gene: | ENSSTOG00000003401 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393514.1:1831552..1835784(-) |
>ENSSTOG00000003401
AGCGCAGTGATGTTTACCGGCAAAAAACGCGGACGCTGCGCCTCTATGAATTTGGTCCCTCTGGAGGCGCCGTCTGAGTG
CGTACCTCCTCCGCGTCATGTGACCAAGGCCTGTAACGGAGGACCGGCGCCGGGGTGGCTTTCGAGCGGGATGGAGGCGA
CTTTGGAGCAGCACTTGGAGGATACAATGAAGAATCCGTCCATTGTTGGAGTCCTGTGCACAGATTCACAAGGACTTAAT
CTGGGCTGTCGTGGGACTCTGTCAGATGAACATGCTGGGGTTATATTTGTTCTAGCCCAACAAGCAGCTAAGCTAACCTC
TGACCCCACTGATATTCCTGTGGTGTGCCTAGAATCAGATAATGGGAACATTATGATCCAAAAACATGATGGCATCACCG
TGGCAGTGCACAAAATGGCCTCTTGA
AGCGCAGTGATGTTTACCGGCAAAAAACGCGGACGCTGCGCCTCTATGAATTTGGTCCCTCTGGAGGCGCCGTCTGAGTG
CGTACCTCCTCCGCGTCATGTGACCAAGGCCTGTAACGGAGGACCGGCGCCGGGGTGGCTTTCGAGCGGGATGGAGGCGA
CTTTGGAGCAGCACTTGGAGGATACAATGAAGAATCCGTCCATTGTTGGAGTCCTGTGCACAGATTCACAAGGACTTAAT
CTGGGCTGTCGTGGGACTCTGTCAGATGAACATGCTGGGGTTATATTTGTTCTAGCCCAACAAGCAGCTAAGCTAACCTC
TGACCCCACTGATATTCCTGTGGTGTGCCTAGAATCAGATAATGGGAACATTATGATCCAAAAACATGATGGCATCACCG
TGGCAGTGCACAAAATGGCCTCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011504 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000014970 | ortholog_many2many | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000013405 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003438 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000005672 | ortholog_one2many | 3 retrogenes | |
| Equus caballus | ENSECAG00000021821 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000023792 | possible_ortholog | 5 retrogenes | |
| Homo sapiens | ENSG00000134248 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016522 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012907 | possible_ortholog | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000005264 | ortholog_one2many | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007198 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000015023 | ortholog_many2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003833 | ortholog_one2many | 5 retrogenes | |
| Mus musculus | ENSMUSG00000087260 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002449 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033478 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000004283 | ortholog_one2many | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000001078 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006807 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009117 | ortholog_one2many | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006011 | ortholog_one2many | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001319 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_86 | 94.51 | 64.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_154 | 93.41 | 64.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_198 | 64.71 | 71.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_587 | 88.78 | 69.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_itri_1196 | 78.89 | 63.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000003401 retrocopies