RetrogeneDB ID: | retro_ttru_1827 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_92966:59823..60418(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSTTRG00000009268 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 89.55 % |
Parental protein coverage: | 70.42 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVKVLATVTKPVGGDKNGGTRVVK |
.GKPHCSRNPV.VRG.GRYSRSAMYSRKALYKRKYS.AKSKVEKKK.VK.LATVTKPVG.DKNG.T.VV. | |
Retrocopy | QGKPHCSRNPVVVRGMGRYSRSAMYSRKALYKRKYSVAKSKVEKKK-VKALATVTKPVGSDKNGSTWVVN |
Parental | LRKMPRYYPTEDVPRKLLSHGKK-PFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTG |
L.KMPRY.PTEDVPRKLLSH.KK.PFSKHVRK.RASITP.TIL.ILTGRHRGKRVIFLKQLSSGLLLVTG | |
Retrocopy | LHKMPRYHPTEDVPRKLLSHSKK>PFSKHVRKPRASITPATILLILTGRHRGKRVIFLKQLSSGLLLVTG |
Parental | PLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDTERE |
PLSLNRVPLRRTHQK.VIA.STKIDISGVKIPEHLTDAYF.KKKL.KPRHQEGEIFDTERE | |
Retrocopy | PLSLNRVPLRRTHQKSVIAASTKIDISGVKIPEHLTDAYF-KKKLHKPRHQEGEIFDTERE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |