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Detailed information on CNT0032208


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SR71|TAF12_ARATH, E-value = 2e-43

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0023169, E-value = 4e-07 (A. trichopoda)
CNT0010996, E-value = 1e-13 (S. tuberosum)
CNT0038783, E-value = 9e-08 (S. moellendorffii)
CNT0036087, E-value = 4e-13 (C. reinhardtii)

Expression of CNT0032208

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYLLHLGPLNIGHIQDHTMLLQFRTHRMHF*

>peptide 2 (54 aa)
MGQRPTAAHQSLPWSGALLLSDPILCQLICHWLLIAVKPIICTLFCLSPEKKCRL

>peptide 3 (111 aa)
GPQSHPSPRPNPRNPSSKPRQCAAAGAPHEASVHSPGLAHHDVLLSGHGRGLFLLCFRSGRHLCVLICHATGRCSPWATSAPACAADARRLHRVRAAADT
RRAVRLDASGS*

>peptide 4 (485 aa)
APNPTPAPVQTLETPAPSPASARPPVPRMRPPYTHLASPITMSSSPATGAASSSSASAPAATSASSSAMPRGGVALGLPAHPRAPQTPVGYTGFVPPPTL
AAQFGSMHRGPDQPPPSSTQPSPGIQNIGTVGSINTSQVRPGAISSLPQQTRPNFPSSTAPSPSDSQIASSQKTPIQALARPPSMASSPSMPLQQTPPNV
SAPLRPPQHRPHPRPYHAPAISHPQNALLTQQQQKLPQHQHLQQQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQQTTT
LRNQQQISQQQTARTPVSMAQKLDSPAVLKATNVQSGDMASVDVDAGGSGNRLLSKRSIHELVAQIDPSEKLDPEVEDVLIDIAEDFVESVATFACSLAK
HRKSSILEAKDVLLHAERSWNITLPGFSGDEIKLYKKPHVNDIHRERLTLIKKSMASESNAKGSAAQAAANQKNQTPKPPATGSP*

>peptide 5 (29 aa)
MCNLETWLQSMWMLEDLVIDCFPRGVYMN*

Sequence

>CNT0032208
CGGCCCCCAATCCCACCCCAGCCCCCGTCCAAACCCTAGAAACCCCAGCTCCAAGCCCCGCCAGTGCGCGGCCGCCGGTGCCCCGCATGAGGCCTCCGTA
CACTCACCTGGCCTCGCCCATCACGATGTCCTCCTCTCCGGCCACGGGCGCGGCCTCTTCCTCCTCTGCTTCCGCTCCGGCCGCCACCTCTGCGTCCTCA
TCTGCCATGCCACGGGGAGGTGTAGCCCTTGGGCTACCAGCGCACCCGCGTGCGCCGCAGACGCCCGTCGGCTACACCGGGTTCGTGCCGCCGCCGACAC
TCGCCGCGCAGTTCGGCTCGATGCATCGGGGTCCTGACCAGCCCCCACCATCCTCTACACAGCCTTCCCCTGGGATCCAAAATATTGGGACAGTTGGTTC
CATTAACACATCTCAGGTGAGACCAGGAGCAATCTCTAGTCTGCCACAGCAGACAAGGCCAAATTTTCCATCTTCAACAGCACCATCTCCATCTGATAGC
CAGATTGCAAGTTCACAAAAAACCCCCATCCAAGCTTTGGCAAGACCACCATCTATGGCTTCTTCCCCCTCGATGCCTTTACAGCAAACTCCGCCAAATG
TATCTGCTCCACTTAGGCCCCCTCAACATAGGCCACATCCAAGACCATACCATGCTCCTGCAATTTCGCACCCACAGAATGCACTTTTAACACAGCAGCA
GCAAAAACTACCACAACATCAACATTTGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAAAAACTACAGCAACAGCAGCAGCAGCAGCAACAAAAACTA
CAGCAGCAGCAGCAGCAGCAGCAACAAAAGCTACAGCAGCAGCAGCAGCAACAACAAAATCAGCCACAACATTCCTCGCAGCAAAGTCAACAGACTACAA
CACTCAGAAACCAGCAACAAATTTCTCAGCAGCAAACTGCTCGTACCCCTGTCTCAATGGCTCAGAAGCTAGATTCTCCTGCTGTACTAAAAGCTACTAA
TGTGCAATCTGGAGACATGGCTTCAGTCGATGTGGATGCTGGAGGATCTGGTAATCGACTGCTTTCCAAGAGGAGTATACATGAATTAGTTGCACAGATT
GATCCTTCAGAAAAGCTTGATCCTGAAGTTGAAGATGTTCTTATTGACATTGCAGAAGATTTTGTTGAATCTGTTGCAACATTTGCTTGTTCTTTAGCAA
AACATAGAAAGTCAAGCATTTTAGAAGCAAAAGATGTACTCCTCCATGCAGAGAGAAGCTGGAATATTACCTTGCCAGGCTTCAGTGGAGATGAAATAAA
ACTGTACAAGAAGCCGCATGTCAATGATATTCACAGGGAGAGGCTTACTCTGATCAAGAAGTCAATGGCCAGCGAAAGTAACGCAAAGGGCTCTGCTGCG
CAAGCTGCAGCTAACCAGAAAAATCAGACACCCAAGCCACCTGCCACAGGCTCTCCATGAAAGAAATTCAATAGGATTACCCTCCAAATCCTGAGCCATC
AATGCATTGTCATCATATTCGGTGTTTGGACGATATGTGCTGTAGTACATCTTCAACTAATTGGCATTGGCTTGTTGTATTATAGGACTGTACAACTGTT
GGGACCGTTAGTAGGACTGCAAGATTACATGTACAAATGCTTTTTCTGAAGAGTAGATCTATTGAAATGCTAATTCAGTTATTTTGGGTTCAGCTGCAAG
TTGCAACCGTTCAGCCGTGGTAATACTCAAAACTTGCAATGGCATGGTGCTCCAATTCAGGATTTCTGCTTGAGAAATTGGGAATCACATCGGGCCCCAG
ACGAACAGTCATTCTATAGCTGATGCCTGGCTATGGGGCAGCGGCCAACAGCTGCTCACCAGTCACTCCCTTGGAGTGGAGCGTTACTTCTGTCTGACCC
TATCTTGTGTCAACTGATCTGTCATTGGCTACTCATTGCCGTGAAACCAATAATATGTACTCTGTTCTGTCTAAGCCCAGAGAAGAAATGCCGTTTGG