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Detailed information on CNT0044074


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004080, E-value = 8e-08 (V. vinifera)
CNT0035175, E-value = 4e-16 (P. patens)
CNT0020781, E-value = 9e-11 (Z. mays)
CNT0000254, E-value = 1e-15 (G. max)
CNT0023174, E-value = 9e-11 (A. trichopoda)
CNT0032070, E-value = 1e-09 (O. sativa)
CNT0017109, E-value = 2e-14 (S. tuberosum)
CNT0038248, E-value = 3e-07 (S. moellendorffii)

Expression of CNT0044074

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MMMMIMMMRSNNGNYEKNIQKPGHHSEMISYINGQRQTKT*

>peptide 2 (38 aa)
MHHWANQTTTNQNCRNDKRRSDSSFLEKKPLPNKDLIN*

>peptide 3 (45 aa)
MSSLHTFLDIVCLIYDKIIQKLIMFHAIGSYSVKFSDLQVQFTGI*

>peptide 4 (87 aa)
MPSGLIVLSSQIFKFSSRAFNQAEVNMYIGPTSLVNPFLNKAISRVTILLSRVTARNKGSNLVIRSIHHYPEAQALLRYQLSISRSS*

>peptide 5 (83 aa)
MCVCVYIYIYREREREREKERQRQRSRSSNKDNESQQEKTKRHHSNSLESSSQGLNLTKNNNIQLQMINYINTKQQRLVIKEK*

Sequence

>CNT0044074
TAGAGTATTGAACACAACCATAATTGTTTTATCAATTCAGTAATACTTTGAAAATATTATGGCAACAGAAATGTATGCGTCCACGTGTAATAAAGCCCTT
AACACCTAAAGAGAATTCGGAAGAAGACTTATAAGAAGATGTCCAGTCTCCACACTTTTTTGGATATTGTTTGCTTAATTTATGACAAAATAATCCAAAA
GCTGATAATGTTTCATGCCATCGGGTCTTATAGTGTTAAGTTCTCAGATCTTCAAGTTCAGTTCACGGGCATTTAATCAAGCTGAGGTAAATATGTATAT
TGGGCCAACTAGTCTAGTTAACCCGTTTCTGAACAAAGCCATCTCAAGGGTTACAATTTTACTATCTCGCGTAACAGCGAGAAACAAAGGATCAAACTTG
GTAATACGCTCAATACACCACTACCCTGAGGCTCAAGCCTTGTTAAGATATCAATTAAGCATTAGCCGCAGTTCTTAAGCAGTCCAAACAATCTCGAATG
TTTGCTCCAACGCTTCAGCGTCTAGGATTTAATTTTCCGACTTTAAAGAATCAATATTACTAACATAGAAACCAGATATCTATTGACTAGAACTGATAGA
TATGAGAACAACGATTGGACAGATTAAAACCCAAAATTTCAAACTCCTTCACTTTCAGTAATAGACAAATTAAGAAAGAAAAAAACAGAGAATCAAGCCC
TCAGGTCTTAAAAGACAATTGTTTTACAACTTAGTCATAGATGGCACAACGCATTGGCTTCTTCTATGCCAAAGACCATTAAGATCATATCTCCATCGCT
GCAACCAAACATGTATGTGTGTATGTGTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGACAGAGACAGAGAAGCAGGAGCAG
CAACAAAGATAATGAGTCTCAGCAAGAAAAAACCAAGCGGCACCACTCAAACTCATTAGAGTCATCATCACAGGGCTTAAATCTCACCAAAAATAACAAC
ATACAACTACAAATGATTAACTACATCAATACCAAACAACAAAGATTAGTGATAAAAGAAAAATAGCCCTCAGTATTCACAAAAATCTGTCATATACGGC
GCATCAAAATCAGGTTTTCAAATATACTCAAAGTTACCATTGCAAGAAACCAGTAGTAGCAGCAGCAGCAGAGAACACAAGAAGCAGAGGAAGAAGAAGA
AGAAGAAGACTGTTGAGATGATGATGATGATAATGATGATGAGGAGCAACAATGGTAACTACGAGAAGAACATTCAAAAACCAGGGCACCACTCAGAAAT
GATTTCTTACATCAATGGGCAAAGACAAACCAAAACATAAAAACCGAAACTTTAATTAAAAAACAAAGCCCTCAGATCTCATAGCTATAAATTTGATCAT
TCACGGCTTAGAGTAAATGGGTAAAATCCGGCAACCTAAAAAATCCCTGAACACCACCGTTTCGCATCCGACGCACGTGTGAGACGGATAGATGGTAAGG
GTGGAAGTGTGCGCGTGTGAATGTCGTCGGAGACGAAACGACGGCGTTCAAGGCTATTAGGTTAAAACAACACGCCGGAGATTACCCAAATACAACCGCT
CTATAACATAATTTTATGCATCATTGGGCAAATCAAACAACAACAAACCAAAATTGCAGAAACGATAAAAGAAGATCGGATTCAAGTTTTTTAGAAAAAA
AACCATTACCTAACAAAGATTTGATAAACTAGAAACAAACAAAAAAACAATTACCAAGCAAAATTTCAATAAACTAGAAACAAAAATAGCTAATCGGCGA
GAAGGAAGCCAGGA