Detailed information on CNT0006299


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0035276, E-value = 4e-06 (P. patens)
CNT0023377, E-value = 6e-14 (A. trichopoda)
CNT0030105, E-value = 9e-07 (O. sativa)
CNT0036309, E-value = 4e-09 (C. reinhardtii)

Expression of CNT0006299

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWQFHLLLVAQETLILNKNPKSHFYAYFLIWVFFVKSLKRYIYM*

>peptide 2 (37 aa)
MCVCVCERERERYACKGPPMLSTSKVINALTIFRNSH*

>peptide 3 (58 aa)
MDDAFHLCVCVCVCVRERERDMHVRVPPCSQPLKLLMLLQYLETLTNLSAICMVVVLA*

>peptide 4 (34 aa)
MIGLSFPHESTLLGSALLLLLMGAPLSVEAASMI*

>peptide 5 (48 aa)
LLCFSFWCEPYATLLLKPCKLVPPPYTTVYSSSPWMMPSICVYVCVCV*

>peptide 6 (37 aa)
MPFEYFKIPHCALGLSHAVLFLLIHEDINLPCCLIWN*

Sequence

>CNT0006299
CTTTGCTTTGTTTTTCTTTTTGGTGTGAACCTTATGCAACACTACTATTGAAACCATGCAAATTGGTCCCCCCACCATATACTACCGTTTACAGTAGTTC
TCCATGGATGATGCCTTCCATTTGTGTGTATGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGATATGCATGTAAGGGTCCCCCCATGCTCTCAACCTC
TAAAGTTATTAATGCTCTTACAATATTTAGAAACTCTCACTAACCTGTCTGCAATCTGCATGGTGGTGGTGTTGGCGTGACAATATTCAATTTGCATCAC
TTGGGACCACTTTACTTCAATAATTTTCAAAGCTTTTCAGTTCCTCTATTCTCCATCTTGTGTCAAATAAAATTTGATTACTCCCCTTTAATTTCCTCTC
TTCACACTTCTATTTATATCCTTCACATCCTCTCTTCTCTAGGTGAACTTTAGCTGCAGAAGCAGCAGAAGAAGCAGCTCTGTTGTATGATAGGTCTCTC
TTTTCCCCATGAGTCTACCCTACTAGGGAGTGCTCTTCTTCTTCTTCTAATGGGTGCACCACTATCAGTTGAAGCTGCCAGCATGATCTAAACTTGCTTC
CCTTTGTGAACAGAGATCAGATCATGTGGCAGTTTCACCTGTTGTTGGTAGCACAAGAAACCCTAATCCTGAATAAAAACCCTAAGTCCCACTTCTATGC
TTACTTTCTCATCTGGGTTTTCTTTGTAAAATCCCTAAAAAGGTATATATATATGTGATCTTCTTGTCTTGGATTTTTGCTCATCTGGGTTTCTGTGACA
TCCTTCTTTTGAAGTACGTTAATTCTGGTGTTCTGAATGTGGGGTTTTCTTGTTTTAAACTTGCGCGAAAAAAATGTTAGCTTGATGAGTTGGTTAGGGT
TTTGAGTGACAGGATCTTTTTGCGTCTCCATGCCATTTGAATATTTCAAGATCCCCCACTGTGCTTTGGGATTGAGTCATGCCGTACTATTTCTGTTAAT
TCATGAGGATATCAATCTCCCTTGCTGTCTGATTTGGAATTGACCCAGGCATATCCATCTACCTAAGTTTTTACGAAGTGGGGATCTGCCCAGCAATGGT
CGGAGAAGTCAGGAAAATATGTTGAGGTGAACCAGAAAAGTTCATGGGAGCTGGATCTAACTGTCGACTTAGTAAGTGTTGAGTGTTCACTATTCTATCA
TCTGTCATTGCATTATATGTTGTCTGTTTTGGGGTAGGAGAGAGCTCAGACCTATATGCCCCATTAAATTCTTTTTGACCTTCGTCTTCTTCCCTCAGGT
TGAATTCTT