Parental gene:

H3F3B, ENSONIG00000019975

Aliases:None
Description:H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]
Organism:Tilapia (Oreochromis niloticus)
Coordinates:GL831136.1:8064376..8065026(-)


>ENSONIG00000019975
ATGGCTCGTACAAAGCAGACCGCTCGTAAATCCACAGGAGGAAAGGCGCCTAGGAAGCAGCTGGCCACCAAAGCAGCCAG
GAAAAGCGCGCCCTCTACTGGTGGAGTGAAGAAACCCCACAGATACAGGCCCGGTACTGTTGCTCTGCGTGAGATCCGTC
GGTACCAGAAGTCCACTGAGCTGCTCATCAGGAAGCTGCCTTTCCAGCGTCTGGTCAGGGAAATCGCTCAAGACTTCAAG
ACGGATCTGCGTTTCCAGAGCGCAGCCATTGGTGCTCTCCAGGAAGCCAGCGAGGCCTACTTGGTCGGCCTGTTTGAGGA
CACCAACCTGTGCGCCATTCACGCAAAGAGGGTCACCATCATGCCCAAGGACATTCAGCTGGCCAGGCGAATTAGAGGAG
AGCGAGCATAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012702 possible_ortholog 10 retrogenes
retro_cjac_145, retro_cjac_198, retro_cjac_201, retro_cjac_224, retro_cjac_235, retro_cjac_238, retro_cjac_307, retro_cjac_334, retro_cjac_366, retro_cjac_68,
Dasypus novemcinctus ENSDNOG00000024843 possible_ortholog 2 retrogenes
retro_dnov_1624, retro_dnov_775,
Equus caballus ENSECAG00000006904 possible_ortholog 1 retrogene
retro_ecab_916,
Equus caballus ENSECAG00000016948 possible_ortholog 1 retrogene
retro_ecab_266,
Latimeria chalumnae ENSLACG00000004118 possible_ortholog 1 retrogene
retro_lcha_104,
Loxodonta africana ENSLAFG00000008083 possible_ortholog 3 retrogenes
retro_lafr_837, retro_lafr_959, retro_lafr_99,
Loxodonta africana ENSLAFG00000021624 possible_ortholog 4 retrogenes
retro_lafr_172, retro_lafr_410, retro_lafr_546, retro_lafr_832,
Microcebus murinus ENSMICG00000002139 possible_ortholog 2 retrogenes
retro_mmur_36, retro_mmur_371,
Myotis lucifugus ENSMLUG00000015447 possible_ortholog 10 retrogenes
retro_mluc_146, retro_mluc_1571, retro_mluc_2286, retro_mluc_2344, retro_mluc_2364, retro_mluc_246, retro_mluc_2468, retro_mluc_2500, retro_mluc_392, retro_mluc_613,
Mustela putorius furo ENSMPUG00000004555 possible_ortholog 4 retrogenes
retro_mputfur_389, retro_mputfur_82, retro_mputfur_99, retro_mputfur_990,
Oryctolagus cuniculus ENSOCUG00000024644 possible_ortholog 2 retrogenes
retro_ocun_185, retro_ocun_217,
Oreochromis niloticus ENSONIG00000015805 within_species_paralog 7 retrogenes
retro_onil_45, retro_onil_47, retro_onil_51, retro_onil_54, retro_onil_61, retro_onil_65, retro_onil_69,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,
Ictidomys tridecemlineatus ENSSTOG00000024226 possible_ortholog 8 retrogenes
retro_itri_315, retro_itri_449, retro_itri_465, retro_itri_505, retro_itri_649, retro_itri_695, retro_itri_764, retro_itri_771,
Tupaia belangeri ENSTBEG00000006177 possible_ortholog 13 retrogenes
retro_tbel_110, retro_tbel_1274, retro_tbel_15, retro_tbel_170, retro_tbel_2335, retro_tbel_3341, retro_tbel_3342, retro_tbel_3820, retro_tbel_391, retro_tbel_487, retro_tbel_592, retro_tbel_783, retro_tbel_978,
Tupaia belangeri ENSTBEG00000016171 possible_ortholog 7 retrogenes
retro_tbel_3459, retro_tbel_3605, retro_tbel_3824, retro_tbel_3856, retro_tbel_4243, retro_tbel_4350, retro_tbel_674,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_onil_41 97.06 100.00
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2. retro_onil_46 97.06 100.00
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3. retro_onil_56 97.06 100.00
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4. retro_onil_60 97.06 100.00
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5. retro_onil_63 97.06 100.00
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Download FASTA sequences of all ENSONIG00000019975 retrocopies