Parental gene: | RHO (1 of 2), ENSONIG00000017219 |
| Aliases: | None |
| Description: | rhodopsin [Source:HGNC Symbol;Acc:10012] |
| Organism: | Tilapia (Oreochromis niloticus) |
| Coordinates: | GL831137.1:7169359..7173317(+) |
>ENSONIG00000017219
ATGAATGGCACAGAAGGACCCAACTTCTATGTACCCATGTCTAACAAGACTGGGGTGGTGCGCAGCCCATTTGAGTACCC
TCAGTACTACCTGGCTGAGCCCTGGAAGTACTCTCTTCTTGCAGCGTACATGCTGTTCCTCATCATTTCTTCCTTCCCCA
TTAACTTTCTCACCCTCTACGTCACTGTCAAGCACAAAAAGCTGAGGACCCCGCTGAACTACGTTCTGCTCAACCTGGCG
GTGGCCGACCTCTTTATGGTAGTTGGGGGCTTCACGGTCACTCTCTACACGGCCCTGCATGGATATTTCGTCTTAGGTGT
CAGCGGCTGCAATATTGAAGGATTCTTTGCCACATTAGGAGGAGAGATTGCTCTCTGGTCTCTGGTGGTTTTGGCTATTG
AGCGCTATATTGTGGTCTGTAAGCCGATGACCAACTTCCGCTTTGGAGAAAAACATGCCATGGCCGGCCTGGGTTTCACA
TGGGTCATGGCCCTGACCTGTGCTGCTCCCCCTCTCTTTGGATGGTCCCGGTACAGGTATATCCCAGAGGGAATGCAGTG
TTCCTGTGGGATTGACTACTACACTCCCAAGCCTGAGATCAACAACACCTCGTTCGTCATCTATATGTTTGTCCTCCACT
TCTGTATCCCCCTGTTCATCATCTTCTTCTGCTACACTAGCCTCCTCTGCACTGTGCGAGCGGCTGCAGCTCAGCAGCAG
GAGTCTGAAACCACCCAGAGGGCAGAGAAAGAAGTGACTCGCATGGTCATTGTCATGGTGATCTCCTTTTTGGTATGCTG
GGTGCCCTATGCCAGCGTGGCTTGGTACATCTTTGCCAATCAGGGAACTGAGTTTGGGCCAGTATTCATGACTGCTCCCG
CCTTCTTCGCCAAGAGTGCCGCTCTGTACAATCCAGTCATCTACATCCTGCTAAACAGACAGTTCAGAAACTGCATGATC
ACCACGGTGTGCTGTGGAAAGAACCCATTTGGAGAAGATGAGGGCGCCGTCTCCAAAACTCAGACTTCATCCGTCTCTTC
AAGCCAGGTGGCCCCCGCTTGA
ATGAATGGCACAGAAGGACCCAACTTCTATGTACCCATGTCTAACAAGACTGGGGTGGTGCGCAGCCCATTTGAGTACCC
TCAGTACTACCTGGCTGAGCCCTGGAAGTACTCTCTTCTTGCAGCGTACATGCTGTTCCTCATCATTTCTTCCTTCCCCA
TTAACTTTCTCACCCTCTACGTCACTGTCAAGCACAAAAAGCTGAGGACCCCGCTGAACTACGTTCTGCTCAACCTGGCG
GTGGCCGACCTCTTTATGGTAGTTGGGGGCTTCACGGTCACTCTCTACACGGCCCTGCATGGATATTTCGTCTTAGGTGT
CAGCGGCTGCAATATTGAAGGATTCTTTGCCACATTAGGAGGAGAGATTGCTCTCTGGTCTCTGGTGGTTTTGGCTATTG
AGCGCTATATTGTGGTCTGTAAGCCGATGACCAACTTCCGCTTTGGAGAAAAACATGCCATGGCCGGCCTGGGTTTCACA
TGGGTCATGGCCCTGACCTGTGCTGCTCCCCCTCTCTTTGGATGGTCCCGGTACAGGTATATCCCAGAGGGAATGCAGTG
TTCCTGTGGGATTGACTACTACACTCCCAAGCCTGAGATCAACAACACCTCGTTCGTCATCTATATGTTTGTCCTCCACT
TCTGTATCCCCCTGTTCATCATCTTCTTCTGCTACACTAGCCTCCTCTGCACTGTGCGAGCGGCTGCAGCTCAGCAGCAG
GAGTCTGAAACCACCCAGAGGGCAGAGAAAGAAGTGACTCGCATGGTCATTGTCATGGTGATCTCCTTTTTGGTATGCTG
GGTGCCCTATGCCAGCGTGGCTTGGTACATCTTTGCCAATCAGGGAACTGAGTTTGGGCCAGTATTCATGACTGCTCCCG
CCTTCTTCGCCAAGAGTGCCGCTCTGTACAATCCAGTCATCTACATCCTGCTAAACAGACAGTTCAGAAACTGCATGATC
ACCACGGTGTGCTGTGGAAAGAACCCATTTGGAGAAGATGAGGGCGCCGTCTCCAAAACTCAGACTTCATCCGTCTCTTC
AAGCCAGGTGGCCCCCGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gadus morhua | ENSGMOG00000013755 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000015868 | other_paralog | 1 retrogene | |
| Oryzias latipes | ENSORLG00000010979 | ortholog_one2one | 1 retrogene | |
| Tetraodon nigroviridis | ENSTNIG00000017925 | ortholog_one2one | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000010617 | ortholog_one2one | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000017297 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_onil_16 | 73.88 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSONIG00000017219 retrocopies