Parental gene: | ARI5, AT1G05890 |
| Aliases: | None |
| Description: | Probable E3 ubiquitin-protein ligase ARI5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L829] |
| Organism: | Mouse-ear cress (Arabidopsis thaliana) |
| Coordinates: | 1:1779255..1784529(+) |
>AT1G05890
ATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGA
TAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGGTGG
CTTCGATTTTAGTGTCTTGTTTTGGGCTGCTTTTGCAGAGATGGCGAATGTTGGAAGCTGTTTTTTGTTTGTTTGTTTGT
TTTTTTTTTTTTGGTTTAAGACTTTTGCTTTATTCATGCAATAGTAATTATGTTGTTCTCAAGGAAGAAGATATTCGCAG
GCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACT
ATCACTGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAG
GGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCCTACACTCTTGAGGAAATTGT
ATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCT
GTTTGATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAA
GACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGG
ATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGA
ATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAA
AATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCA
CATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTG
GTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATG
GCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGG
GGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTA
TCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGAT
CATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAA
GGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCA
GCATAACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGC
AGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTC
CAGCAGAAACCCAGATGGCAATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica oleracea | Bo5g007100 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo8g005850 | ortholog_one2many | 1 retrogene | |
| Brassica rapa | Bra015463 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS04G0492100 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atha_22 | 87.30 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all AT1G05890 retrocopies