Parental gene:

RAB22A, ENSAMEG00000012646

Aliases:None
Description:RAB22A, member RAS oncogene family [Source:HGNC Symbol;Acc:9764]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192436.1:1597736..1645733(-)


>ENSAMEG00000012646
CTCGTTCTTTTTCAGGATACAGGTGTAGGTAAATCGAGTATCGTGTGGCGGTTCGTGGAAGACAGTTTTGATCCAAACAT
CAATCCAACCATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGGATA
CAGCTGGACAAGAACGATTCCGTGCCTTAGCGCCAATGTACTATCGAGGGTCGGCTGCGGCCATCATTGTTTACGACATC
ACAAAAGAAGAGACATTCTCAACGCTGAAGAACTGGGTGAAAGAGCTCCGGCAGCACGGCCCGCCCAATATCGTCGTTGC
TATTGCCGGGAATAAGTGTGATCTTATCGACGTCAGAGAAGTCATGGAGAGAGATGCCAAGGACTACGCCGACTCCATCC
ATGCGATTTTTGTGGAGACCAGCGCAAAAAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCG
TCCGCTGACACCAACCCGCCATCTGGCGGTAAGGGCTTCAAGCTCCGGAGACAGCCTTCCGAGCCGCAGCGAAGCTGCTG
C

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000954 within_species_paralog 1 retrogene
retro_amel_958,
Ailuropoda melanoleuca ENSAMEG00000006003 within_species_paralog 1 retrogene
retro_amel_543,
Canis familiaris ENSCAFG00000012101 ortholog_one2one 1 retrogene
retro_cfam_501,
Callithrix jacchus ENSCJAG00000019039 ortholog_one2one 2 retrogenes
retro_cjac_1715, retro_cjac_842,
Microcebus murinus ENSMICG00000008382 ortholog_one2one 1 retrogene
retro_mmur_1546,
Oryctolagus cuniculus ENSOCUG00000004414 ortholog_one2one 1 retrogene
retro_ocun_554,
Otolemur garnettii ENSOGAG00000015779 ortholog_one2one 1 retrogene
retro_ogar_2851,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_617 53.25 79.68
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Download FASTA sequences of all ENSAMEG00000012646 retrocopies