Parental gene:

RAB22A, ENSOCUG00000004414

Aliases:None
Description:RAB22A, member RAS oncogene family [Source:HGNC Symbol;Acc:9764]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL019007:131186..182840(-)


>ENSOCUG00000004414
CTCGTTCTCTTTCAGGATACGGGTGTAGGTAAATCCAGCATCGTCTGGCGGTTTGTGGAAGACAGCTTTGATCCGAACAT
CAACCCAACCATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTCCATAAATTCCTAATCTGGGATA
CAGCGGGACAAGAACGATTCCGTGCCTTAGCACCAATGTACTATCGTGGGTCGGCTGCAGCCATCATCGTCTATGACATT
ACAAAAGAAGAGACATTCTCCACGTTAAAGAACTGGGTAAAGGAGCTTCGACAGCACGGGCCGCCCAATATTGTGGTTGC
CATTGCAGGAAATAAGTGTGATCTTATCGATGTCAGAGAAGTCATGGAGAGAGATGCTAAGGACTATGCCGACTCCATTC
ATGCAATTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCC
TCCGGGGACACCAGCCAGCCCTCTGGCAGTAAGGGCTTCAAACTCCGGAGGCAGCCTTCAGAGCCAAGGCGGAGCTGCTG
C

Library Parental gene expression (RPM)
SRP017611_liver 5 .86 RPM
SRP017611_kidney 15 .81 RPM
SRP017611_brain 17 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012646 ortholog_one2one 1 retrogene
retro_amel_617,
Canis familiaris ENSCAFG00000012101 ortholog_one2one 1 retrogene
retro_cfam_501,
Callithrix jacchus ENSCJAG00000019039 ortholog_one2one 2 retrogenes
retro_cjac_1715, retro_cjac_842,
Microcebus murinus ENSMICG00000008382 ortholog_one2one 1 retrogene
retro_mmur_1546,
Oryctolagus cuniculus ENSOCUG00000012200 within_species_paralog 1 retrogene
retro_ocun_1034,
Oryctolagus cuniculus ENSOCUG00000013895 within_species_paralog 1 retrogene
retro_ocun_1193,
Otolemur garnettii ENSOGAG00000015779 ortholog_one2one 1 retrogene
retro_ogar_2851,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_554 66.96 58.29
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Download FASTA sequences of all ENSOCUG00000004414 retrocopies