Parental gene: | RAB22A, ENSCJAG00000019039 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:52302065..52357153(+) |
>ENSCJAG00000019039
CTCATTCTCTTTCAGGATACAGGTGTAGGTAAATCGAGTATTGTGTGGCGGTTTGTGGAAGACAGTTTTGATCCAAACAT
CAATCCAACAATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGGATA
CAGCTGGACAAGAACGATTTCGTGCCTTAGCACCAATGTACTATCGAGGGTCGGCCGCAGCTATAATCGTTTATGATATC
ACAAAAGAAGAGACATTTTCAACATTAAAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGC
CATTGCAGGAAATAAGTGTGATCTTATTGATGTAAGAGAAGTCATGGAGAGAGATGCAAAGGACTACGCCGACTCTATTC
ATGCAATTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCA
TCCACTGACGCCAACCCGCCATCTGGTGGTAAGGGCTTCAAACTCCGAAGGCAGCCTTCAGAGCCAAAGCGGAGCTGCTG
TTGA
CTCATTCTCTTTCAGGATACAGGTGTAGGTAAATCGAGTATTGTGTGGCGGTTTGTGGAAGACAGTTTTGATCCAAACAT
CAATCCAACAATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGGATA
CAGCTGGACAAGAACGATTTCGTGCCTTAGCACCAATGTACTATCGAGGGTCGGCCGCAGCTATAATCGTTTATGATATC
ACAAAAGAAGAGACATTTTCAACATTAAAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGC
CATTGCAGGAAATAAGTGTGATCTTATTGATGTAAGAGAAGTCATGGAGAGAGATGCAAAGGACTACGCCGACTCTATTC
ATGCAATTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCA
TCCACTGACGCCAACCCGCCATCTGGTGGTAAGGGCTTCAAACTCCGAAGGCAGCCTTCAGAGCCAAAGCGGAGCTGCTG
TTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .49 RPM |
| SRP051959_skeletal_muscle | 10 .83 RPM |
| SRP051959_lymph_node | 13 .84 RPM |
| SRP051959_lung | 13 .57 RPM |
| SRP051959_liver | 8 .38 RPM |
| SRP051959_kidney | 11 .87 RPM |
| SRP051959_heart | 11 .54 RPM |
| SRP051959_colon | 11 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012646 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012101 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000000472 | within_species_paralog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003731 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004529 | within_species_paralog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007527 | within_species_paralog | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000008382 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004414 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015779 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_842 | 84.71 | 83.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1715 | 87.36 | 92.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019039 retrocopies