Parental gene:

NIP30, ENSBTAG00000002242

Aliases:FAM192A, NIP30
Description:protein FAM192A [Source:RefSeq peptide;Acc:NP_001014944]
Organism:Cow (Bos taurus)
Coordinates:18:25254471..25294908(-)


>ENSBTAG00000002242
ATGGATGGAGGGGATGATGGTAACCTTGTTATCAAAAAGAGGTTTGTATCTGAGGCAGAGCTAGATGAACGGCGCAAAAG
GAGACAAGAAGAATGGGAAAAAGTTCGAAAACCTGAAGATCCAGAAGAATGCCCAGAGGAGGTTTATGACCCTCGGTCCC
TGTATGAAAGGCTACAGGAACAGAAAGACAGGAAGCAGCAGGAGTATGAAGAACAGTTCAAATTCAAAAACATGGTAAGA
GGCTTAGATGAAGATGAGACCAACTTCCTTGATGAGGTTTCTCGGCAGCAAGAGCTAATAGAAAAACAGCGAAGAGAAGA
AGAACTGAAAGAACTGAAGGAATACAGAAGTAATCTCAACAAGGTTGGAATTTCTTCAGAAAACAAGAAGGAAGTGGAGA
AGAAAGCTGTGAAACCCATAGAAACCAAGAACAAGTTCTCCCAGGCAAAGCTGTTGGCAGGAGCTGTGAAGCATAAGAGT
TCAGAGAGTGGAAACAGTGTGAAAAGACTGAAATCTGACCCTGACCCAGATGACAAGAATCAAGAAGCCTCGTCCTGCGT
GTCTCTGGGAAGCACCTCCCTGAGCAGTCCCTCCATCCACTGTCCATCCGCGGCTGTCTGTATTGGCATCCTCCCGGGCC
TGGGCGCCTACTCCGGGAGCAGCGACTCTGAGTCCAGCTCAGACAGCGAAGGCACCATCAACGCCACGGGCAAGATCGTC
TCCTCCATCTTCCGAACCAACACCTTCCTCGAGGCCCCCTAG

Library Parental gene expression (RPM)
ERP005899_liver 4 .61 RPM
ERP005899_muscle 18 .63 RPM
SRP017611_brain 12 .06 RPM
SRP017611_kidney 10 .85 RPM
SRP017611_liver 5 .13 RPM
SRP030211_testis 72 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000001392 ortholog_one2many 1 retrogene
retro_cpor_122,
Equus caballus ENSECAG00000009324 ortholog_one2one 1 retrogene
retro_ecab_710,
Echinops telfairi ENSETEG00000014379 ortholog_one2one 1 retrogene
retro_etel_930,
Homo sapiens ENSG00000172775 ortholog_one2one 1 retrogene
retro_hsap_2994,
Gorilla gorilla ENSGGOG00000003938 ortholog_one2one 1 retrogene
retro_ggor_2074,
Macaca mulatta ENSMMUG00000013492 ortholog_one2many 1 retrogene
retro_mmul_189,
Mus musculus ENSMUSG00000031774 ortholog_one2one 1 retrogene
retro_mmus_428,
Nomascus leucogenys ENSNLEG00000002716 ortholog_one2one 1 retrogene
retro_nleu_745,
Ochotona princeps ENSOPRG00000006909 ortholog_one2one 2 retrogenes
retro_opri_175, retro_opri_579,
Pongo abelii ENSPPYG00000007382 ortholog_one2one 1 retrogene
retro_pabe_2480,
Pan troglodytes ENSPTRG00000008148 ortholog_one2one 1 retrogene
retro_ptro_2025,
Tarsius syrichta ENSTSYG00000013300 ortholog_one2one 1 retrogene
retro_tsyr_884,
Tursiops truncatus ENSTTRG00000012791 ortholog_one2one 1 retrogene
retro_ttru_1884,
Vicugna pacos ENSVPAG00000005973 ortholog_one2one 1 retrogene
retro_vpac_321,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1133 98.81 100.00
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Download FASTA sequences of all ENSBTAG00000002242 retrocopies