Parental gene:

SEC61B, ENSBTAG00000002457

Aliases:None
Description:protein transport protein Sec61 subunit beta [Source:RefSeq peptide;Acc:NP_001068760]
Organism:Cow (Bos taurus)
Coordinates:8:64722965..64731269(+)


>ENSBTAG00000002457
ATGCCTGGCCCGGCCCCCAGTGGCACTAACGTGGGCTCCTCAGGACGCTCTCCCAGCAAAGCAGTGGCGGCCCGGGCAGC
GGGATCCACCGTCCGGCAGAGGAAGAATGCCAGCTGTGGAACAAGGAGCGCAGGCCGTACGACCTCAGCGGGCACTGGGG
GGATGTGGCGATTCTACACAGAGGATTCACCAGGGCTCAAAGTGGGCCCTGTTCCAGTATTGGTTATGAGTCTTCTGTTC
ATCGCTTCTGTATTTATGTTGCACATTTGGGGCAAGTACACTCGTTCATAG

Library Parental gene expression (RPM)
SRP017611_brain 11 .19 RPM
SRP017611_kidney 43 .98 RPM
SRP017611_liver 126 .55 RPM
ERP005899_muscle 79 .50 RPM
ERP005899_liver 44 .05 RPM
SRP030211_testis 24 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011279 ortholog_one2one 1 retrogene
retro_cjac_503,
Equus caballus ENSECAG00000026930 ortholog_one2one 1 retrogene
retro_ecab_711,
Echinops telfairi ENSETEG00000005293 ortholog_one2one 4 retrogenes
retro_etel_1777, retro_etel_1889, retro_etel_483, retro_etel_695,
Homo sapiens ENSG00000106803 ortholog_one2one 1 retrogene
retro_hsap_871,
Gorilla gorilla ENSGGOG00000004205 ortholog_one2one 1 retrogene
retro_ggor_708,
Macropus eugenii ENSMEUG00000000321 ortholog_one2one 1 retrogene
retro_meug_1921,
Microcebus murinus ENSMICG00000011121 ortholog_one2one 4 retrogenes
retro_mmur_1037, retro_mmur_1631, retro_mmur_435, retro_mmur_543,
Myotis lucifugus ENSMLUG00000001097 ortholog_one2one 1 retrogene
retro_mluc_2170,
Macaca mulatta ENSMMUG00000010661 ortholog_one2many 1 retrogene
retro_mmul_86,
Mus musculus ENSMUSG00000053317 ortholog_one2many 2 retrogenes
retro_mmus_1377, retro_mmus_2679,
Nomascus leucogenys ENSNLEG00000017055 ortholog_one2one 1 retrogene
retro_nleu_2844,
Otolemur garnettii ENSOGAG00000004168 ortholog_one2one 3 retrogenes
retro_ogar_1132, retro_ogar_2671, retro_ogar_823,
Pongo abelii ENSPPYG00000019441 ortholog_one2one 1 retrogene
retro_pabe_680,
Pan troglodytes ENSPTRG00000021184 ortholog_one2one 1 retrogene
retro_ptro_606,
Rattus norvegicus ENSRNOG00000006345 ortholog_one2one 1 retrogene
retro_rnor_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_360 85.42 97.92
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2. retro_btau_791 91.67 100.00
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3. retro_btau_1053 61.73 81.25
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Download FASTA sequences of all ENSBTAG00000002457 retrocopies