Parental gene:

FBL, ENSBTAG00000002579

Aliases:None
Description:rRNA 2'-O-methyltransferase fibrillarin [Source:RefSeq peptide;Acc:NP_001192329]
Organism:Cow (Bos taurus)
Coordinates:18:49659187..49718941(-)


>ENSBTAG00000002579
ATGAAACCAGGGTTCAGCCCCCGCGGGGGTGGCTTCGGTGGCCGCGGTGGCTTTGGTGACCGTGGAGGTCGCGGTGGTGG
CCGCGGAGGCTTCGGCGGGGGCCGAGGAGGCTTCGGCGGAGGCCGAGGTCGCGGTGGAGGAGGAGGAGGCTTCAGGGGCC
GTGGACGAGGAGGGGGAGGAAGAGGTGGCGGGTTCCAGTCTGGTGGCAACCGGGGTCGTGGTCGGGGAGGAAAGAAAGGA
AACCCGTCGGGGAAGAATGTGATGGTAGAGCCCCATCGACATGAGGGCGTCTTCATTTGTCGAGGAAAGGAAGATGCACT
GGTCACCAAGAACCTGGTCCCTGGGGAATCCGTTTACGGAGAGAAGAGAGTCTCGATTTCGGAGGGAGATGACAAAATTG
AGTACCGTGCCTGGAACCCTTTCCGTTCCAAGCTGGCAGCGGCGATCCTGGGCGGGGTGGACCAGATCCACATCAAGCCG
GGGGCCAAGGTCCTCTACCTCGGGGCTGCCTCGGGCACCACCGTCTCCCACGTCTCTGATATCGTCGGCCCAGACGGTCT
GGTCTATGCAGTTGAGTTCTCCCACCGTTCTGGCCGTGACCTCATTAACTTGGCCAAGAAGCGGACCAACATTATTCCTG
TCATTGAAGACGCTCGGCACCCACACAAATACCGCATGCTCATCGCAATGGTGGATGTGATCTTTGCTGACGTGGCCCAG
CCAGACCAGACCCGGATTGTAGCCCTGAATGCCCACACCTTCCTGCGTAATGGAGGACACTTTGTGATTTCCATTAAGGC
TAATTGCATTGACTCCACAGCTTCCGCAGAGGCTGTCTTTGCCTCTGAAGTGAAAAAGATGCAGCAAGAGAACATGAAGC
CCCAGGAGCAGCTGACCCTAGAGCCGTACGAAAGAGACCATGCTGTGGTCGTGGGTGTGTACAGGCCACCTCCCAAAGTG
AAGAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 6 .99 RPM
SRP017611_kidney 15 .59 RPM
SRP017611_liver 14 .04 RPM
ERP005899_muscle 40 .01 RPM
ERP005899_liver 8 .29 RPM
SRP030211_testis 33 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005412 ortholog_one2one 1 retrogene
retro_cfam_1697,
Homo sapiens ENSG00000105202 ortholog_one2one 1 retrogene
retro_hsap_99,
Macropus eugenii ENSMEUG00000014684 ortholog_one2many 1 retrogene
retro_meug_1077,
Microcebus murinus ENSMICG00000007686 ortholog_one2one 1 retrogene
retro_mmur_1127,
Mus musculus ENSMUSG00000046865 ortholog_one2one 4 retrogenes
retro_mmus_1141, retro_mmus_1585, retro_mmus_1609, retro_mmus_89,
Nomascus leucogenys ENSNLEG00000014234 ortholog_one2one 1 retrogene
retro_nleu_1947,
Otolemur garnettii ENSOGAG00000006463 ortholog_one2one 2 retrogenes
retro_ogar_3102, retro_ogar_504,
Pan troglodytes ENSPTRG00000010982 ortholog_one2one 2 retrogenes
retro_ptro_2208, retro_ptro_3074,
Pteropus vampyrus ENSPVAG00000010849 ortholog_one2one 1 retrogene
retro_pvam_231,
Rattus norvegicus ENSRNOG00000019229 ortholog_one2many 4 retrogenes
retro_rnor_1082, retro_rnor_1780, retro_rnor_643, retro_rnor_75,
Sus scrofa ENSSSCG00000030510 ortholog_one2one 1 retrogene
retro_sscr_39,
Tupaia belangeri ENSTBEG00000007755 ortholog_one2one 2 retrogenes
retro_tbel_3774, retro_tbel_3974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_108 76.99 99.07
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Download FASTA sequences of all ENSBTAG00000002579 retrocopies