Parental gene: | FBL, ENSPTRG00000010982 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:44999132..45010665(-) |
>ENSPTRG00000010982
ATGAAGCCAGGATTCAGTCCCCGTGGGGGTGGCTTTGGCGGCCGAGGGGGCTTTGGTGACCGTGGTGGTCGTGGAGGCCG
AGGGGGCTTTGGCGGGGGCCGAGGTCGAGGCGGAGGCTTTAGAGGTCGTGGACGAGGAGGAGGTGGAGGCGGCGGCGGCG
GTGGAGGAGGAGGAAGAGGTGGTGGAGGCTTCCATTCTGGTGGCAACCGGGGTCGTGGTCGGGGAGGAAAAAGAGGAAAC
CAGTCGGGGAAGAATGTGATGGTGGAGCCGCATCGGCATGAGGGTGTCTTCATTTGTCGAGGAAAGGAAGATGCACTGGT
CACCAAGAACCTGGTCCCTGGGGAATCAGTTTATGGAGAGAAGAGAGTCTCGATTTCGGAAGGAGATGACAAAATTGAGT
ACCGAGCCTGGAACCCCTTCCGCTCCAAGCTAGCAGCAGCAATCCTGGGTGGTGTGGACCAGATCCACATCAAACCGGGG
GCTAAGGTTCTCTACCTCGGGGCTGCCTCGGGCACCACGGTCTCCCATGTCTCTGACATCGTTGGTCCGGATGGTCTAGT
CTATGCAGTCGAGTTCTCCCACCGCTCTGGCCGTGACCTCATTAACTTGGCCAAGAAGAGGACCAACATCATTCCTGTGA
TCGAGGATGCTCGACACCCACACAAATACCGCATGCTCATCGCAATGGTGGATGTGATCTTTGCTGATGTGGCCCAGCCA
GACCAGACCCGGATTGTGGCCCTGAATGCCCACACCTTCCTGCGTAATGGAGGACACTTTGTGATTTCCATTAAGGCCAA
CTGCATTGACTCCACAGCCTCAGCCGAGGCCGTGTTTGCCTCCGAAGTGAAAAAGATGCAACAGGAGAACATGAAGCCGC
AGGAGCAGTTGACCCTTGAGCCATACGAAAGAGACCATGCCGTGGTCGTGGGAGTGTACAGGCCACCCCCCAAGGTGAAG
AACTGA
ATGAAGCCAGGATTCAGTCCCCGTGGGGGTGGCTTTGGCGGCCGAGGGGGCTTTGGTGACCGTGGTGGTCGTGGAGGCCG
AGGGGGCTTTGGCGGGGGCCGAGGTCGAGGCGGAGGCTTTAGAGGTCGTGGACGAGGAGGAGGTGGAGGCGGCGGCGGCG
GTGGAGGAGGAGGAAGAGGTGGTGGAGGCTTCCATTCTGGTGGCAACCGGGGTCGTGGTCGGGGAGGAAAAAGAGGAAAC
CAGTCGGGGAAGAATGTGATGGTGGAGCCGCATCGGCATGAGGGTGTCTTCATTTGTCGAGGAAAGGAAGATGCACTGGT
CACCAAGAACCTGGTCCCTGGGGAATCAGTTTATGGAGAGAAGAGAGTCTCGATTTCGGAAGGAGATGACAAAATTGAGT
ACCGAGCCTGGAACCCCTTCCGCTCCAAGCTAGCAGCAGCAATCCTGGGTGGTGTGGACCAGATCCACATCAAACCGGGG
GCTAAGGTTCTCTACCTCGGGGCTGCCTCGGGCACCACGGTCTCCCATGTCTCTGACATCGTTGGTCCGGATGGTCTAGT
CTATGCAGTCGAGTTCTCCCACCGCTCTGGCCGTGACCTCATTAACTTGGCCAAGAAGAGGACCAACATCATTCCTGTGA
TCGAGGATGCTCGACACCCACACAAATACCGCATGCTCATCGCAATGGTGGATGTGATCTTTGCTGATGTGGCCCAGCCA
GACCAGACCCGGATTGTGGCCCTGAATGCCCACACCTTCCTGCGTAATGGAGGACACTTTGTGATTTCCATTAAGGCCAA
CTGCATTGACTCCACAGCCTCAGCCGAGGCCGTGTTTGCCTCCGAAGTGAAAAAGATGCAACAGGAGAACATGAAGCCGC
AGGAGCAGTTGACCCTTGAGCCATACGAAAGAGACCATGCCGTGGTCGTGGGAGTGTACAGGCCACCCCCCAAGGTGAAG
AACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 23 .33 RPM |
| SRP007412_cerebellum | 44 .92 RPM |
| SRP007412_heart | 26 .44 RPM |
| SRP007412_kidney | 42 .29 RPM |
| SRP007412_liver | 61 .87 RPM |
| SRP007412_testis | 49 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002579 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005412 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000105202 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014684 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007686 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000046865 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014234 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006463 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010849 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019229 | ortholog_one2many | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000030510 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007755 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2208 | 82.28 | 78.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_3074 | 98.10 | 81.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010982 retrocopies