RetrogeneDB ID: | retro_nleu_1947 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397318.1:13088048..13088747(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FBL | ||
Ensembl ID: | ENSNLEG00000014234 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.55 % |
Parental protein coverage: | 65.82 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VLVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQI |
V.VEPHRHEGVFI.RG.EDALVT.N.VPG.SVYGE.RV...EG..K.EYR.WNPFRSKLAAAILGGVDQI | |
Retrocopy | VSVEPHRHEGVFIYRGAEDALVTLNMVPGQSVYGERRVTVTEGGVKQEYRTWNPFRSKLAAAILGGVDQI |
Parental | HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRM |
HIKP..KVLYLGAASGTTVSHVSDI.GPDGLVYAVEFSHR.GRDL.N.AKKRTNIIPV.EDARHP.KYRM | |
Retrocopy | HIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRM |
Parental | LIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE |
LI.MVDVIFADVAQPDQ.RIVALNAHTFLRNGGHF.ISIKANCIDSTASAEAVFASEV.K.QQEN.KPQE | |
Retrocopy | LIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQE |
Parental | QLTLEPYERDHAVVVGVYRPPPK |
QLTLEPYERDHAVVVGVYRP.PK | |
Retrocopy | QLTLEPYERDHAVVVGVYRPLPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000002579 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000005412 | 1 retrocopy | |
Homo sapiens | ENSG00000105202 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014684 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000007686 | 1 retrocopy | |
Mus musculus | ENSMUSG00000046865 | 4 retrocopies | |
Nomascus leucogenys | ENSNLEG00000014234 | 1 retrocopy |
retro_nleu_1947 ,
|
Otolemur garnettii | ENSOGAG00000006463 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000010982 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000010849 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000019229 | 4 retrocopies | |
Sus scrofa | ENSSSCG00000030510 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000007755 | 2 retrocopies |