Parental gene:

BT.100842, ENSBTAG00000003401

Aliases:None
Description:Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P61157]
Organism:Cow (Bos taurus)
Coordinates:2:65892591..65912704(+)


>ENSBTAG00000003401
ATTGCTATTAAAGAGTCAGCAAAAGTGGGAGATCAAGCTCAAAGGAGGGTGATGAAAGGTGTTGACGACCTAGACTTCTT
CATTGGTGATGAAGCAATAGAAAAACCTACATATGCAACAAAGTGGCCAATCCGCCATGGTATAGTTGAAGACTGGGACT
TGATGGAAAGGTTTATGGAGCAAGTCATCTTTAAATATTTAAGGGCGGAACCTGAAGATCATTATTTTCTTTTGACTGAA
CCTCCACTGAATACTCCAGAAAACAGGGAATATACTGCTGAAATAATGTTTGAGTCTTTCAATGTTCCTGGCTTGTACAT
TGCTGTACAGGCCGTTCTTGCCTTAGCTGCGTCTTGGACCTCTAGACAAGTAGGAGAACGGACGTTGACCGGTACGGTAA
TAGACAGTGGAGACGGTGTCACTCATGTCATCCCTGTGGCTGAAGGGTATGTGATTGGCAGCTGTATTAAGCACATTCCC
ATCGCAGGACGAGATATAACATATTTTATTCAGCAATTGTTGAGAGACCGAGAAGTAGGAATTCCTCCAGAGCAGTCCTT
GGAAACTGCTAAGGCAGTGAAGGAGCGCTATAGTTATGTCTGCCCAGACTTAGTAAAAGAATTTAACAAGTATGATACAG
ATGGATCAAAGTGGATTAAACAGTATACTGGAATCAATGCTATCTCAAAGAAAGAGTTTTCCATTGATGTTGGATATGAG
AGATTCTTGGGACCTGAAATTTTTTTTCATCCAGAGTTTGCTAACCCAGACTTTACCCAGCCTATCTCAGAAGTTGTAGA
TGAAGTAATTCAGAATTGTCCTATCGATGTCAGACGTCCTCTCTACAAGAATATTGTCCTCTCTGGAGGTTCAACCATGT
TCAGGGACTTTGGACGTCGTTTGCAAAGAGATTTGAAAAGAACTGTAGATGCCAGGCTGAAATTAAGTGAGGAATTGAGT
GGTGGTAGATTGAAGCCAAAACCTATTGATGTACAAGTCATTACACATCACATGCAACGATACGCAGTTTGGTTTGGAGG
ATCTATGCTGGCTTCCACACCTGAGTTCTACCAAGTATGCCACACCAAAAAGGATTATGAAGAAATTGGACCTAGCATTT
GTCGTCACAATCCAGTGTTTGGAGTCATGTCGTAA

Library Parental gene expression (RPM)
SRP017611_brain 62 .63 RPM
SRP017611_kidney 76 .70 RPM
SRP017611_liver 23 .86 RPM
ERP005899_muscle 139 .47 RPM
ERP005899_liver 27 .97 RPM
SRP030211_testis 87 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014091 ortholog_one2many 4 retrogenes
retro_cjac_3602, retro_cjac_3813, retro_cjac_385, retro_cjac_4005,
Homo sapiens ENSG00000115091 ortholog_one2one 2 retrogenes
retro_hsap_1391, retro_hsap_4694,
Gorilla gorilla ENSGGOG00000011346 ortholog_one2one 1 retrogene
retro_ggor_2921,
Mustela putorius furo ENSMPUG00000010717 ortholog_one2one 1 retrogene
retro_mputfur_1275,
Mus musculus ENSMUSG00000026341 ortholog_one2one 1 retrogene
retro_mmus_3653,
Nomascus leucogenys ENSNLEG00000011619 ortholog_one2one 2 retrogenes
retro_nleu_1077, retro_nleu_2364,
Pongo abelii ENSPPYG00000012798 ortholog_one2one 1 retrogene
retro_pabe_3647,
Pan troglodytes ENSPTRG00000012388 ortholog_one2one 2 retrogenes
retro_ptro_3118, retro_ptro_955,
Vicugna pacos ENSVPAG00000009479 ortholog_one2one 1 retrogene
retro_vpac_468,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_672 93.18 57.03
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Download FASTA sequences of all ENSBTAG00000003401 retrocopies