Parental gene:

ACTR3, ENSPPYG00000012798

Aliases:ACTR3, ARP3
Description:Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5R8R1]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:20797418..20872792(-)


>ENSPPYG00000012798
ATGGCGGGACGGCTGCCGGCCTGTGTGGTGGACTGTGGCACGGGGTATACAAAACTAGGATATGCTGGAAATACAGAACC
ACAGTTTATCATCCCTTCCTGTATTGCTATTAAGGAGTCAGCAAAAGTGGGTGATCAAGCTCAAAGGAGGGTGATGAAAG
GTGTTGATGACCTAGACTTCTTCATTGGTGATGAAGCAATAGAAAAACCTACATATGCAACAAAGTGGCCAATCCGCCAT
GGTATAGTTGAAGATTGGGACTTAATGGAAAGGTTTATGGAGCAAGTGATCTTTAAATATTTAAGGGCAGAACCTGAAGA
CCATTATTTTCTTTTGACTGAACCTCCATTGAATACTCCAGAAAACAGGGAATATACTGCTGAAATAATGTTTGAGTCCT
TCAATGTTCCAGGCTTGTACATTGCTGTGCAGGCTGTTCTTGCCTTAGCTGCATCTTGGACCTCAAGACAAGTAGGAGAA
CGGACGTTGACTGGTACGGTAATAGACAGTGGAGATGGTGTCACTCATGTCATTCCTGTGGCTGAAGGGTATGTGATTGG
CAGCTGTATTAAACACATTCCAATCGCAGGACGAGATATAACATATTTTATTCAGCAACTGCTGAGAGACCGAGAAGTAG
GAATCCCTCCAGAACAATCCTTGGAAACTGCTAAGGCAGTAAAGGAGCGCTATAGTTATGTCTGCCCAGATTTAGTAAAA
GAATTTAACAAGTATGATACAGATGGGTCAAAGTGGATTAAACAGTATACTGGAATCAATGCTATCTCAAAGAAAGAATT
TTCTATCGATGTTGGTTATGAGAGATTTTTGGGACCTGAAATCTTTTTTCATCCAGAGTTTGCTAATCCAGACTTTACAC
AACCTATCTCAGAAGTTGTAGATGAAGTAATTCAGAATTGTCCTATTGATGTCAGACGTCCTCTCTACAAGAATATTGTC
CTCTCTGGAGGTTCAACCATGTTCAGGGACTTTGGACGTCGCTTGCAAAGAGATTTGAAAAGAACTGTAGATGCCCGGCT
GAAATTAAGTGAGGAATTGAGTGGCGGTAGATTGAAGCCAAAACCTATTGATGTACAAGTCATTACACACCACATGCAGC
GATATGCAGTTTGGTTTGGAGGATCAATGCTGGCTTCCACGCCTGAGTTCTACCAAGTATGCCACACCAAAAAGGATTAT
GAAGAAATTGGACCTAGCATTTGTCGTCACAATCCAGTGTTTGGAGTCATGTCGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 55 .51 RPM
SRP007412_cerebellum 50 .71 RPM
SRP007412_heart 41 .18 RPM
SRP007412_kidney 62 .95 RPM
SRP007412_liver 64 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003401 ortholog_one2one 1 retrogene
retro_btau_672,
Callithrix jacchus ENSCJAG00000014091 ortholog_one2one 4 retrogenes
retro_cjac_3602, retro_cjac_3813, retro_cjac_385, retro_cjac_4005,
Homo sapiens ENSG00000115091 ortholog_one2one 2 retrogenes
retro_hsap_1391, retro_hsap_4694,
Gorilla gorilla ENSGGOG00000011346 ortholog_one2one 1 retrogene
retro_ggor_2921,
Mustela putorius furo ENSMPUG00000010717 ortholog_one2one 1 retrogene
retro_mputfur_1275,
Mus musculus ENSMUSG00000026341 ortholog_one2one 1 retrogene
retro_mmus_3653,
Nomascus leucogenys ENSNLEG00000011619 ortholog_one2one 2 retrogenes
retro_nleu_1077, retro_nleu_2364,
Pongo abelii ENSPPYG00000018206 within_species_paralog 1 retrogene
retro_pabe_2460,
Pan troglodytes ENSPTRG00000012388 ortholog_one2one 2 retrogenes
retro_ptro_3118, retro_ptro_955,
Vicugna pacos ENSVPAG00000009479 ortholog_one2one 1 retrogene
retro_vpac_468,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3647 76.79 82.06
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Download FASTA sequences of all ENSPPYG00000012798 retrocopies