Parental gene:

BT.30256, ENSBTAG00000004659

Aliases:None
Description:coenzyme Q-binding protein COQ10 homolog B, mitochondrial [Source:RefSeq peptide;Acc:NP_001069122]
Organism:Cow (Bos taurus)
Coordinates:2:86410859..86427846(+)


>ENSBTAG00000004659
ATGATCATGGCAGCTCGGATAGGTCAAAGAGCCCTGAAAAAGGTGGTCTCGGGATGCTGTCCGAAGTCGGCGGCAGCCGC
CAGAGCCCCGGCTCCGGCGCAGGTGCCTGCGAGGAACGTCAGTTATTTGGCTTCCTGTGGTATACTGATGAGCAGAACTC
TTCCACTACATACCTCAGTTTTTCCTAAGAAGATACACGCAAGAACCTTCTTCAGAATTGCTGCACCATTAATAAACAAA
AGAAAAGAATATTCAGAAAGGAGAATTATAGGTTATTCTATGCAGGAAATGTATGATGTGGTATCTGGAATGGAGGATTA
CAAGCATTTTGTTCCTTGGTGTAAAAAATCAGATATAATATCAAGGAGATCTGGATACTGCAAAACACGATTAGAAATTG
GGTTTCCACCTGTATTGGAGCGCTATACATCAGTAGTAACCTTGGTGAAACCACATTTGGTGAAGGCATCCTGTACTGAT
GGGAAGCTCTTCAATCATTTGGAGACTGTTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACTTTGGA
TTTTTCAATTTCTTTTGAATTTCGCTCACTTCTACACTCTCAGCTTGCCATGTTGTTTTTCGATGAAGTTGTAAAGCAGA
TGGTAACTGCCTTTGAAAGAAGAGCGTGTAAGCTGTATGGTCCAGAAACAAACATACCTCGGGAACTGATGCTTCATGAA
GTTCATCACACGTAA

Library Parental gene expression (RPM)
ERP005899_liver 49 .24 RPM
ERP005899_muscle 6 .86 RPM
SRP017611_brain 12 .61 RPM
SRP017611_kidney 29 .52 RPM
SRP017611_liver 13 .52 RPM
SRP030211_testis 24 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005807 ortholog_one2one 1 retrogene
retro_chof_1504,
Callithrix jacchus ENSCJAG00000003971 ortholog_one2one 1 retrogene
retro_cjac_1836,
Dasypus novemcinctus ENSDNOG00000003229 ortholog_one2one 2 retrogenes
retro_dnov_1571, retro_dnov_2203,
Dipodomys ordii ENSDORG00000004090 ortholog_one2one 1 retrogene
retro_dord_508,
Erinaceus europaeus ENSEEUG00000001626 ortholog_one2one 1 retrogene
retro_eeur_401,
Felis catus ENSFCAG00000022385 ortholog_one2one 1 retrogene
retro_fcat_1487,
Homo sapiens ENSG00000115520 ortholog_one2one 1 retrogene
retro_hsap_3349,
Gorilla gorilla ENSGGOG00000023373 ortholog_one2one 2 retrogenes
retro_ggor_2270, retro_ggor_569,
Myotis lucifugus ENSMLUG00000000865 ortholog_one2one 1 retrogene
retro_mluc_1236,
Macaca mulatta ENSMMUG00000010488 ortholog_one2one 1 retrogene
retro_mmul_2434,
Monodelphis domestica ENSMODG00000012281 ortholog_one2one 1 retrogene
retro_mdom_600,
Mus musculus ENSMUSG00000025981 ortholog_one2one 1 retrogene
retro_mmus_3224,
Nomascus leucogenys ENSNLEG00000006871 ortholog_one2one 1 retrogene
retro_nleu_1172,
Ochotona princeps ENSOPRG00000010091 ortholog_one2one 3 retrogenes
retro_opri_1020, retro_opri_173, retro_opri_664,
Pongo abelii ENSPPYG00000013045 ortholog_one2one 2 retrogenes
retro_pabe_2758, retro_pabe_576,
Pan troglodytes ENSPTRG00000012772 ortholog_one2one 1 retrogene
retro_ptro_2137,
Rattus norvegicus ENSRNOG00000014456 ortholog_one2one 1 retrogene
retro_rnor_1620,
Tarsius syrichta ENSTSYG00000012642 ortholog_one2one 2 retrogenes
retro_tsyr_1213, retro_tsyr_1666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1595 80.36 68.03
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2. retro_btau_1832 77.89 80.74
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Download FASTA sequences of all ENSBTAG00000004659 retrocopies