Parental gene:

VMA21, ENSBTAG00000006296

Aliases:None
Description:Vacuolar ATPase assembly integral membrane protein VMA21 [Source:UniProtKB/Swiss-Prot;Acc:A2VDK9]
Organism:Cow (Bos taurus)
Coordinates:X:34102419..34112798(+)


>ENSBTAG00000006296
ATGGAGCGCCTTGATAAAGCGGCGCTGAACGCGCTGCAGCCGTCCGACTTCAGAAATGAAAGTTCATTAGCATCCACTCT
GAAGACGCTCCTGTTCTTCACAGCTTTAATGATCACTGTACCTATTGGGTTATATTTCACAACTAAATCTTACGTTTTTG
AAGGCGCCTTTGGGATGTCCAATAGGGACAGCTATTTTTATGCTGCTATTGTTGCAGTGGTCGCCGTCCACGTGGTGCTG
GCCCTCTTTGTTTATGTGGCCTGGAATGAAGGCTCACGGCAGTGGCGTGAAGGCAAACAGGATTAA

Library Parental gene expression (RPM)
ERP005899_liver 42 .90 RPM
ERP005899_muscle 39 .91 RPM
SRP017611_brain 61 .58 RPM
SRP017611_kidney 107 .40 RPM
SRP017611_liver 25 .82 RPM
SRP030211_testis 28 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003916 possible_ortholog 1 retrogene
retro_cjac_150,
Dasypus novemcinctus ENSDNOG00000008426 possible_ortholog 1 retrogene
retro_dnov_504,
Homo sapiens ENSG00000160131 ortholog_one2one 1 retrogene
retro_hsap_3724,
Macaca mulatta ENSMMUG00000009034 ortholog_one2one 1 retrogene
retro_mmul_1693,
Mus musculus ENSMUSG00000073131 ortholog_one2many 2 retrogenes
retro_mmus_116, retro_mmus_3675,
Nomascus leucogenys ENSNLEG00000013711 ortholog_one2one 1 retrogene
retro_nleu_1971,
Oryctolagus cuniculus ENSOCUG00000015201 ortholog_one2one 1 retrogene
retro_ocun_443,
Pongo abelii ENSPPYG00000020820 ortholog_one2one 1 retrogene
retro_pabe_3133,
Rattus norvegicus ENSRNOG00000049744 ortholog_one2many 1 retrogene
retro_rnor_2843,
Ictidomys tridecemlineatus ENSSTOG00000011179 ortholog_one2one 1 retrogene
retro_itri_500,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1106 50.53 94.06
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Download FASTA sequences of all ENSBTAG00000006296 retrocopies