Parental gene:

VMA21, ENSPPYG00000020820

Aliases:None
Description:Vacuolar ATPase assembly integral membrane protein VMA21 [Source:UniProtKB/Swiss-Prot;Acc:Q5RDV3]
Organism:Orangutan (Pongo abelii)
Coordinates:X:151481456..151493665(+)


>ENSPPYG00000020820
ATGGAGCGCCCGGATAAAGCGGCGCTGAACGCACTGCAGCCTCCGGAGTTCAGAAATGAAAGCTCATTAGCATCTACACT
GAAGACGCTCCTGTTCTTCACAGCTTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTAAATCTTATATATTTG
AAGGCGCCCTTGGGATGTCCAATAGGGACAGCTATTTTTACGCTGCTATTGTTGCAGTGGTCGCCGTCCATGTGGTGCTG
GCCCTCTTTGTGTATGTGGCCTGGAATGAAGGCTCACGACAGTGGCGTGAAGGCAAACAGGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 27 .37 RPM
SRP007412_cerebellum 43 .41 RPM
SRP007412_heart 11 .05 RPM
SRP007412_kidney 22 .24 RPM
SRP007412_liver 16 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006296 ortholog_one2one 1 retrogene
retro_btau_1106,
Callithrix jacchus ENSCJAG00000003916 possible_ortholog 1 retrogene
retro_cjac_150,
Dasypus novemcinctus ENSDNOG00000008426 possible_ortholog 1 retrogene
retro_dnov_504,
Homo sapiens ENSG00000160131 ortholog_one2one 1 retrogene
retro_hsap_3724,
Macaca mulatta ENSMMUG00000009034 ortholog_one2one 1 retrogene
retro_mmul_1693,
Mus musculus ENSMUSG00000073131 ortholog_one2many 2 retrogenes
retro_mmus_116, retro_mmus_3675,
Nomascus leucogenys ENSNLEG00000013711 ortholog_one2one 1 retrogene
retro_nleu_1971,
Oryctolagus cuniculus ENSOCUG00000015201 ortholog_one2one 1 retrogene
retro_ocun_443,
Rattus norvegicus ENSRNOG00000049744 ortholog_one2many 1 retrogene
retro_rnor_2843,
Ictidomys tridecemlineatus ENSSTOG00000011179 ortholog_one2one 1 retrogene
retro_itri_500,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3133 84.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000020820 retrocopies