Parental gene: | RAP1B, ENSBTAG00000008967 |
| Aliases: | None |
| Description: | Ras-related protein Rap-1b [Source:UniProtKB/Swiss-Prot;Acc:P61223] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 5:45355307..45399175(-) |
>ENSBTAG00000008967
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCTGGAGGCGTTGGAAAATCTGCTCTGACTGTACAGTTTGTTCAAGGAAT
TTTTGTTGAAAAATATGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAGCAGTGTATGCTTG
AAATCTTGGATACTGCAGGAACGGAACAATTCACAGCAATGAGGGATTTGTACATGAAAAATGGACAAGGCTTTGCGTTA
GTTTATTCCATCACAGCACAGTCCACATTTAATGATTTACAAGATCTGAGAGAACAGATACTTCGAGTTAAAGACACGGA
TGATGTTCCAATGATTCTGGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGAAAGGAACAAGGTCAAAATC
TAGCAAGACAGTGGAACAACTGTGCATTCTTAGAATCCTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGAC
CTAGTGCGACAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCCCGCAAAAAGTCGTCATGTCAGCTGCTTTAA
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCTGGAGGCGTTGGAAAATCTGCTCTGACTGTACAGTTTGTTCAAGGAAT
TTTTGTTGAAAAATATGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAGCAGTGTATGCTTG
AAATCTTGGATACTGCAGGAACGGAACAATTCACAGCAATGAGGGATTTGTACATGAAAAATGGACAAGGCTTTGCGTTA
GTTTATTCCATCACAGCACAGTCCACATTTAATGATTTACAAGATCTGAGAGAACAGATACTTCGAGTTAAAGACACGGA
TGATGTTCCAATGATTCTGGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGAAAGGAACAAGGTCAAAATC
TAGCAAGACAGTGGAACAACTGTGCATTCTTAGAATCCTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGAC
CTAGTGCGACAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCCCGCAAAAAGTCGTCATGTCAGCTGCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 29 .69 RPM |
| SRP017611_kidney | 61 .64 RPM |
| SRP017611_liver | 15 .33 RPM |
| ERP005899_muscle | 58 .75 RPM |
| ERP005899_liver | 45 .28 RPM |
| SRP030211_testis | 42 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008637 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000008272 | possible_ortholog | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000000242 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016460 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005746 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000030014 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_297 | 69.73 | 98.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_684 | 99.07 | 58.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1564 | 98.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000008967 retrocopies