Parental gene:

BT.49063, ENSBTAG00000009345

Aliases:None
Description:archaemetzincin-2 [Source:RefSeq peptide;Acc:NP_001029653]
Organism:Cow (Bos taurus)
Coordinates:19:62506949..62514776(-)


>ENSBTAG00000009345
ATGCAAACGGTAGGGCACTCTGAACACACCCTGAAGACGGCCCTCATCTCAAAGAACCCAGAGCTTGTGAAGCAGTATGA
GCAGTTGGACCCCGGGGAGCAGCGCCTGCTGAACGAGGCCTTCCGGCCCCGCAGCGATCTCTTTGGACCCATTACTTTGC
ATTCTCCATCGGACTGGATAATCTCCCATCCTGAGGCTCCGCAAGACTTTGAACAGTTTTTCAGTAATCTTCACAGAAAG
AGCCCTTCTCCGGGGAAGCAGACTATTTACATACAGTGCATTGGATTGCTGGGAAACACCAGAAGTATCAGTGAAGAATA
TTTGAAATGGCTCAAGGGCTACTGTGAAGCCTTCTTCTACGGGTTGACAGTCAAACTCCTAGAGCCGATTCCTGTCTCTG
CAACCAGATGTTCCTTTAGAATCAACGATAGCACACTGAACCTTCAGATTCATGCAGGGCAGATCCTGACGTTCTTAAAA
AAGAAGAAACCCGAAGATGCCTTTTGTGTTGTGGGAGTAACGATGATCGATCTTTACCCAAGAGAATCCTGGAATTTTGT
CTTTGGACAGGCTTCTTTGACAGAGGGTGTGGGAATATTCAGCTTTGCCAGGTACGGCACGGACTTCTACAGCTCACACT
ACAAAGGCAAGCTGAAGAAGCTGGAGAGGAAGTCTTCTAGTGACTACTCGGTGTTCAATGACTATTACCTTCCTGAGGCC
ACCAGTGTGCTGCTGCTCCGCTCGTGTAAGACTCTGACCCACGAGATCGGACACATCTTTGGCCTCCGGCACTGCCAGTG
GCTCGCCTGCCTGATGCAAGGCTCCAACCACCTGGAGGAAGCCGACCGGCGCCCGCTGGACCTCTGCCCCATCTGCTTAC
GCAAGCTGCAGAGTGCCGTCGGCTTCCGGCTCAGAGACCGGTACAAAGCACTGGTCAGGTGGATTGATGCCGAGTCCACT
GACACTCCTAGAGTTACTCCAAAACACAGTCGTGAG

Library Parental gene expression (RPM)
ERP005899_liver 29 .27 RPM
ERP005899_muscle 58 .60 RPM
SRP017611_brain 62 .81 RPM
SRP017611_kidney 77 .17 RPM
SRP017611_liver 41 .68 RPM
SRP030211_testis 406 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000493 ortholog_one2one 1 retrogene
retro_chof_2462,
Callithrix jacchus ENSCJAG00000000254 ortholog_one2one 1 retrogene
retro_cjac_2798,
Cavia porcellus ENSCPOG00000013061 ortholog_one2one 1 retrogene
retro_cpor_1226,
Equus caballus ENSECAG00000011450 ortholog_one2one 2 retrogenes
retro_ecab_440, retro_ecab_864,
Felis catus ENSFCAG00000019195 ortholog_one2one 1 retrogene
retro_fcat_760,
Myotis lucifugus ENSMLUG00000006771 ortholog_one2one 2 retrogenes
retro_mluc_1540, retro_mluc_2056,
Mustela putorius furo ENSMPUG00000014570 ortholog_one2one 1 retrogene
retro_mputfur_1224,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_429 61.67 53.01
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Download FASTA sequences of all ENSBTAG00000009345 retrocopies