Parental gene:

AMZ2, ENSCJAG00000000254

Aliases:None
Description:archaelysin family metallopeptidase 2 [Source:HGNC Symbol;Acc:28041]
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:116643805..116655151(+)


>ENSCJAG00000000254
ATGCAGATAGTACGGCACTCTCAGCAGACGCTAAAAACAGCTCTCATCTCAAAGAACCCAGTGCTTGTGTCGCAGTATGA
GAACTTAGATGCTGGGGAACAGCGTTTAATGAATGAAGCCTTCCAGCCAGCCAGTGATCTCTTTGGACCCATTACCTTGC
ATTCTCAATCAGATTGGATCACCTCCCACCCTGAGGCCCCCCAAGACTTTGAACAGTTCTTCAGTGATCCTTACAGAAAG
ATACCCTCTCCAGACAAACACAGTATTTATATACAGTCCATTGGATCTCTAGGAAACACCAGGATTATCAGTGAAGAATA
TATTAAATGGCTGCAGGGCTATTGTAAAGCATATTTCTATGGCTTGAGAGTAAAACTCCTAGAACCAGTTCCTGTTTCTG
CAACAAAATGTTCCTTTAGAGTTAATGAGAACACACAAAACCTACAAATTCATGCAGGGGACATCCTGAAGTTCTTGAAA
AAGAAGAAACCTGAAGATGCCTTCTGCATTGTGGGAATAACAATGATTGATCTTTACCCAAGAGACTCCTGGAATTTTGT
CTTCGGACAGGCCTCTTTGACAGATGGTGTGGGGATATTCAGTTTTGCCAGGTATGGCAGTGATTTTTATAGCTTGCGCT
GTGAAGGCAAAGTGAAGAAGCTCAAGAAAACATCTTCGAGTGACTATTCAATTTTTGACAACTATTATATTCCAGAAATA
ACTAGTGTTTTACTGCTTCGATCCTGTAAGACTTTAACCCATGAGATTGGACACATATTTGGACTGCGACACTGCCAGTG
GCTTGCATGCCTAATGCAAGGCTCTAACCACTTGGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCTGTTTGC
GCAAGTTGCAGTGTGCTATTGGCTTCAGCATTGTAGAAAGATACAAAGCACTGGTGCAGTGGATTGATGATGAATCTGCT
GGCACACCTGGAGCAACTCCAAAACACAGTCGTGAGGATAATGGGAATTTACTAAAACCCATGGAAGCCTTTAAGGAATG
GAAGGAGTGGATAATAAAATGCTTGACTGTTCTCCAAAAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 6 .58 RPM
SRP051959_skeletal_muscle 4 .96 RPM
SRP051959_lymph_node 5 .71 RPM
SRP051959_lung 5 .51 RPM
SRP051959_liver 4 .79 RPM
SRP051959_kidney 7 .03 RPM
SRP051959_heart 6 .44 RPM
SRP051959_colon 2 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009345 ortholog_one2one 1 retrogene
retro_btau_429,
Choloepus hoffmanni ENSCHOG00000000493 ortholog_one2one 1 retrogene
retro_chof_2462,
Cavia porcellus ENSCPOG00000013061 ortholog_one2one 1 retrogene
retro_cpor_1226,
Equus caballus ENSECAG00000011450 ortholog_one2one 2 retrogenes
retro_ecab_440, retro_ecab_864,
Felis catus ENSFCAG00000019195 ortholog_one2one 1 retrogene
retro_fcat_760,
Myotis lucifugus ENSMLUG00000006771 ortholog_one2one 2 retrogenes
retro_mluc_1540, retro_mluc_2056,
Mustela putorius furo ENSMPUG00000014570 ortholog_one2one 1 retrogene
retro_mputfur_1224,
Pteropus vampyrus ENSPVAG00000017239 ortholog_one2one 2 retrogenes
retro_pvam_1453, retro_pvam_989,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2798 54.03 57.22
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000000254 retrocopies